RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SLC12A7Q9Y666 1083 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 FAM86C2PA6NEL3 165 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 PEX10O60683 326 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 FKTNO75072 461 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 USP2O75604 605 aaPredicted RBP6.25□□□□□ -1.41
SPG11-218ENST00000559754 GSNP06396 782 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 GLDCP23378 1020 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 PDE6BP35913 854 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 TRIM26Q12899 539 aaPredicted RBP6.25□□□□□ -1.41
SPG11-218ENST00000559754 ANKRD39Q53RE8 183 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 CEP128Q6ZU80 1094 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 ZSCAN18Q8TBC5 510 aaPredicted RBP6.25□□□□□ -1.41
SPG11-218ENST00000559754 RASGRP4Q8TDF6 673 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 GPRASP2Q96D09 838 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 CRTAC1Q9NQ79 661 aa6.25□□□□□ -1.41
SPG11-218ENST00000559754 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.25□□□□□ -1.41
SPG11-218ENST00000559754 TCAF2A6NFQ2 919 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 MEIS1O00470 390 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 PSPNO60542 156 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 ZNF205O95201 554 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 C1QTNF9P0C862 333 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 MED14OSP0DP75 135 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 SOX9P48436 509 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 NOL9Q5SY16 702 aaKnown RBP6.24□□□□□ -1.41
SPG11-218ENST00000559754 CWF19L1Q69YN2 538 aaKnown RBP6.24□□□□□ -1.41
SPG11-218ENST00000559754 UNC5AQ6ZN44 842 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 NLRX1Q86UT6 975 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 LSRQ86X29 649 aaPredicted RBP6.24□□□□□ -1.41
SPG11-218ENST00000559754 OR6P1Q8NGX9 317 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 KCNN1Q92952 543 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 SHISA4Q96DD7 197 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 GINM1Q9NU53 330 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 MINPP1Q9UNW1 487 aa6.24□□□□□ -1.41
SPG11-218ENST00000559754 OR14I1A6ND48 311 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 C9IYK1 514 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 VAV1P15498 845 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 EIF6P56537 245 aaKnown RBP6.23□□□□□ -1.41
SPG11-218ENST00000559754 GALNT18Q6P9A2 607 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 ZNF605Q86T29 641 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 NT5DC4Q86YG4 428 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 HHIPL1Q96JK4 782 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 CDADC1Q9BWV3 514 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 ZNF552Q9H707 407 aaPredicted RBP6.23□□□□□ -1.41
SPG11-218ENST00000559754 EFR3BQ9Y2G0 817 aa6.23□□□□□ -1.41
SPG11-218ENST00000559754 WTIPA6NIX2 430 aaPredicted RBP6.22□□□□□ -1.41
SPG11-218ENST00000559754 NOTOA8MTQ0 251 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 HRKO00198 91 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 ETV2O00321 342 aaPredicted RBP6.22□□□□□ -1.41
SPG11-218ENST00000559754 SHOXO15266 292 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 SEMA7AO75326 666 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 CTSKP43235 329 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 NOP2P46087 812 aaKnown RBP6.22□□□□□ -1.41
SPG11-218ENST00000559754 RTP1P59025 263 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 HDLBPQ00341 1268 aaKnown RBP6.22□□□□□ -1.41
SPG11-218ENST00000559754 TCEAL1Q15170 157 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 TDRD10Q5VZ19 366 aaKnown RBP6.22□□□□□ -1.41
SPG11-218ENST00000559754 TMEM132EQ6IEE7 984 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 CRTC3Q6UUV7 619 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 ZPBP2Q6X784 338 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 CCDC81Q6ZN84 652 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 ATG14Q6ZNE5 492 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 PPFIBP1Q86W92 1011 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 C19orf47Q8N9M1 422 aaKnown RBP6.22□□□□□ -1.41
SPG11-218ENST00000559754 ZNF214Q9UL59 606 aaPredicted RBP6.22□□□□□ -1.41
SPG11-218ENST00000559754 TAF6LQ9Y6J9 622 aa6.22□□□□□ -1.41
SPG11-218ENST00000559754 A0A1W2PQ45 241 aaPredicted RBP6.21□□□□□ -1.42
SPG11-218ENST00000559754 A0A1W2PQY0 241 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 FADS2P1A8MWK0 482 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 KRT1P04264 644 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 ITGA4P13612 1032 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 PNLIPP16233 465 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 CD247P20963 164 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 ARL4AP40617 200 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 GJA8P48165 433 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 GIPRP48546 466 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 KCNA10Q16322 511 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 AXDND1Q5T1B0 1012 aaPredicted RBP6.21□□□□□ -1.42
SPG11-218ENST00000559754 RUFY4Q6ZNE9 571 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 SIRT2Q8IXJ6 389 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 SRRTQ9BXP5 876 aaKnown RBP6.21□□□□□ -1.42
SPG11-218ENST00000559754 TGIF2Q9GZN2 237 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 GP6Q9HCN6 339 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 CD320Q9NPF0 282 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 ERVK13-1Q9NX77 482 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 SF3B6Q9Y3B4 125 aaKnown RBP6.21□□□□□ -1.42
SPG11-218ENST00000559754 FHOD1Q9Y613 1164 aa6.21□□□□□ -1.42
SPG11-218ENST00000559754 A0A087WZG4 1122 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 TEX51A0A1B0GUA7 166 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 TP53P04637 393 aaPredicted RBP6.2□□□□□ -1.42
SPG11-218ENST00000559754 CFPP27918 469 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 LAPTM5Q13571 262 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 ZYXQ15942 572 aaKnown RBP6.2□□□□□ -1.42
SPG11-218ENST00000559754 HSF5Q4G112 596 aaPredicted RBP6.2□□□□□ -1.42
SPG11-218ENST00000559754 ADGRF1Q5T601 910 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 DCAF15Q66K64 600 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 OLFML2BQ68BL8 750 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 CILP2Q8IUL8 1156 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 LRRC56Q8IYG6 542 aaPredicted RBP6.2□□□□□ -1.42
SPG11-218ENST00000559754 NAT16Q8N8M0 369 aa6.2□□□□□ -1.42
SPG11-218ENST00000559754 RGS22Q8NE09 1264 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms