RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MOV10L1Q9BXT6 1211 aaKnown RBP23.75■■□□□ 1.39
TSPAN3-207ENST00000559494 SPATC1LQ9H0A9 340 aa23.75■■□□□ 1.39
TSPAN3-207ENST00000559494 GNRH1P01148 92 aa23.74■■□□□ 1.39
TSPAN3-207ENST00000559494 CCNA1P78396 465 aa23.74■■□□□ 1.39
TSPAN3-207ENST00000559494 SLC38A10Q9HBR0 1119 aa23.74■■□□□ 1.39
TSPAN3-207ENST00000559494 ZNF214Q9UL59 606 aaPredicted RBP23.74■■□□□ 1.39
TSPAN3-207ENST00000559494 PRR12Q9ULL5 1215 aa23.74■■□□□ 1.39
TSPAN3-207ENST00000559494 A0A0G2JMZ2 1700 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 WDR19Q8NEZ3 1342 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 TNPO2O14787 897 aaKnown RBP23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 EIF5BO60841 1220 aaKnown RBP23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 ZBED4O75132 1171 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 HMGB1P09429 215 aaKnown RBP23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 LIFRP42702 1097 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 PLS1Q14651 629 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 GPATCH4Q5T3I0 446 aaKnown RBP23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 TMTC2Q8N394 836 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 MCOLN1Q9GZU1 580 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 SRRDQ9UH36 339 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 GABRQQ9UN88 632 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 PTPN22Q9Y2R2 807 aa23.73■■□□□ 1.39
TSPAN3-207ENST00000559494 HOXD10P28358 340 aa23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 MAPK4P31152 587 aa23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 STAT3P40763 770 aa23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 SNAP25P60880 206 aa23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 TROAPQ12815 778 aa23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 PKN2Q16513 984 aaKnown RBP23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 SYDE2Q5VT97 1194 aa23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 UBA5Q9GZZ9 404 aa23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 CPVLQ9H3G5 476 aa23.72■■□□□ 1.39
TSPAN3-207ENST00000559494 PARP1P09874 1014 aaKnown RBP23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 FDX1P10109 184 aa23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 ASPRV1Q53RT3 343 aa23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 BLOC1S2Q6QNY1 142 aa23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 CCAR1Q8IX12 1150 aaKnown RBP23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 CPXCR1Q8N123 301 aa23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 STAG2Q8N3U4 1231 aa23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 COA7Q96BR5 231 aa23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 RAVER2Q9HCJ3 691 aaKnown RBP23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 GJD2Q9UKL4 321 aa23.71■■□□□ 1.39
TSPAN3-207ENST00000559494 ATP2A1O14983 1001 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 PSMA5P28066 241 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 FBXO46Q6PJ61 603 aaPredicted RBP23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 NFXL1Q6ZNB6 911 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 GPR142Q7Z601 462 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 PLEKHH3Q7Z736 793 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 CATIPQ7Z7H3 387 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 RIOX2Q8IUF8 465 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 ZNF654Q8IZM8 581 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 SHCBP1Q8NEM2 672 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 MAD2L2Q9UI95 211 aa23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 CTDP1Q9Y5B0 961 aaPredicted RBP23.7■■□□□ 1.38
TSPAN3-207ENST00000559494 PALM3A6NDB9 673 aaPredicted RBP23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 ERCC3P19447 782 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 CASTP20810 708 aaKnown RBP23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 RPS6KB1P23443 525 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 PRMT2P55345 433 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 PRKCZQ05513 592 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 GRM4Q14833 912 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 SGMS1Q86VZ5 419 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 MYL10Q9BUA6 226 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 ZSWIM6Q9HCJ5 1215 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 RIPK3Q9Y572 518 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 SMCHD1A6NHR9 2005 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 BAZ2BQ9UIF8 2168 aaKnown RBP23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 ZNF536O15090 1300 aa23.69■■□□□ 1.38
TSPAN3-207ENST00000559494 HTTP42858 3142 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 CCDC69A6NI79 296 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 SLC25A27O95847 323 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 FLT3LGP49771 235 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 WDR78Q5VTH9 848 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 NCAPG2Q86XI2 1143 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 TEX13BQ9BXU2 312 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 TM6SF1Q9BZW5 370 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 RANBP17Q9H2T7 1088 aaKnown RBP23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 PTCH2Q9Y6C5 1203 aa23.68■■□□□ 1.38
TSPAN3-207ENST00000559494 KLRF2D3W0D1 207 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 PTPREP23469 700 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 OAZ1P54368 228 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 SNRNP48Q6IEG0 339 aaKnown RBP23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 CCDC174Q6PII3 467 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 Q6ZUG5 572 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 RUFY3Q7L099 469 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 TNS4Q8IZW8 715 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 NUP133Q8WUM0 1156 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 AGBL1Q96MI9 1066 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 MROH8Q9H579 483 aa23.67■■□□□ 1.38
TSPAN3-207ENST00000559494 DDAH1O94760 285 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 SLC4A3P48751 1232 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 ANAPC15P60006 121 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 MORN1Q5T089 497 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 ADGRF4Q8IZF3 695 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 USP6NLQ92738 828 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 MAP3K14Q99558 947 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 CWC22Q9HCG8 908 aaKnown RBP23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 BRPF3Q9ULD4 1205 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 SLC12A7Q9Y666 1083 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 PLXNB2O15031 1838 aa23.66■■□□□ 1.38
TSPAN3-207ENST00000559494 SLC35G1Q2M3R5 365 aa23.65■■□□□ 1.38
TSPAN3-207ENST00000559494 RAB11FIP4Q86YS3 637 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms