RNA–Protein interactions for RNA: ENST00000559145.1

RORA-209, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-209ENST00000559145 PRRT2Q7Z6L0 340 aaPredicted RBP11.89□□□□□ -0.51
RORA-209ENST00000559145 NBPF11Q86T75 865 aa11.89□□□□□ -0.51
RORA-209ENST00000559145 KIFC2Q96AC6 838 aa11.89□□□□□ -0.51
RORA-209ENST00000559145 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
RORA-209ENST00000559145 KCNH4Q9UQ05 1017 aa11.89□□□□□ -0.51
RORA-209ENST00000559145 CTDP1Q9Y5B0 961 aaPredicted RBP11.89□□□□□ -0.51
RORA-209ENST00000559145 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
RORA-209ENST00000559145 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
RORA-209ENST00000559145 VPS37CA5D8V6 355 aaPredicted RBP11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L15C9J2P7 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L13C9JLJ4 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L11C9JVI0 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 H3BQV1 296 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 CYTH3O43739 400 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 FLOT1O75955 427 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 XBP1P17861 261 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 GJA5P36382 358 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 GTF2A2P52657 109 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 FUT2Q10981 343 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 SPRYD7Q5W111 196 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
RORA-209ENST00000559145 RGMBQ6NW40 437 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 HEATR3Q7Z4Q2 680 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 SAPCD2Q86UD0 394 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 RASAL3Q86YV0 1011 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 ADGRF4Q8IZF3 695 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
RORA-209ENST00000559145 PIGSQ96S52 555 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 SLF1Q9BQI6 1058 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 RIOX1Q9H6W3 641 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 JMJD4Q9H9V9 463 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 FBXO28Q9NVF7 368 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 PRR12Q9ULL5 1215 aa11.88□□□□□ -0.51
RORA-209ENST00000559145 CCL15-CCL14A0A0B4J2E2 113 aa11.87□□□□□ -0.51
RORA-209ENST00000559145 ZBTB48P10074 688 aaPredicted RBP11.87□□□□□ -0.51
RORA-209ENST00000559145 CETPP11597 493 aa11.87□□□□□ -0.51
RORA-209ENST00000559145 SCG2P13521 617 aa11.87□□□□□ -0.51
RORA-209ENST00000559145 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
RORA-209ENST00000559145 IRX3P78415 501 aaPredicted RBP11.87□□□□□ -0.51
RORA-209ENST00000559145 GRM1Q13255 1194 aa11.87□□□□□ -0.51
RORA-209ENST00000559145 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
RORA-209ENST00000559145 CDC37Q16543 378 aaPredicted RBP11.87□□□□□ -0.51
RORA-209ENST00000559145 CCL15Q16663 113 aa11.87□□□□□ -0.51
RORA-209ENST00000559145 BTNL9Q6UXG8 535 aa11.87□□□□□ -0.51
RORA-209ENST00000559145 C8orf76Q96K31 380 aa11.87□□□□□ -0.51
RORA-209ENST00000559145 PLA2G6O60733 806 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 OSBPP22059 807 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 SNAP25P60880 206 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 GUCY1B3Q02153 619 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 PFKFB3Q16875 520 aaPredicted RBP11.86□□□□□ -0.51
RORA-209ENST00000559145 SLC35G1Q2M3R5 365 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 TREML2Q5T2D2 321 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 CCDC174Q6PII3 467 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 PRPF38AQ8NAV1 312 aaKnown RBP11.86□□□□□ -0.51
RORA-209ENST00000559145 CCDC102AQ96A19 550 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 AIFM3Q96NN9 605 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 AGTPBP1Q9UPW5 1226 aa11.86□□□□□ -0.51
RORA-209ENST00000559145 LOC285556D6RIA3 1793 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 PNMA6FA0A0J9YX94 578 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 ZBTB5O15062 677 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 ZBED4O75132 1171 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 SLC10A3P09131 477 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 SYT1P21579 422 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 APLP1P51693 650 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 NAPAP54920 295 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
RORA-209ENST00000559145 COG2Q14746 738 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 FOXD4L5Q5VV16 416 aaPredicted RBP11.85□□□□□ -0.51
RORA-209ENST00000559145 CATSPERGQ6ZRH7 1159 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 FOXD4L4Q8WXT5 416 aaPredicted RBP11.85□□□□□ -0.51
RORA-209ENST00000559145 GPKOWQ92917 476 aaPredicted RBP eCLIP11.85□□□□□ -0.51
RORA-209ENST00000559145 CHMP5Q9NZZ3 219 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 VPS54Q9P1Q0 977 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 PNMA3Q9UL41 463 aa11.85□□□□□ -0.51
RORA-209ENST00000559145 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
RORA-209ENST00000559145 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
RORA-209ENST00000559145 MANSC4A6NHS7 340 aaPredicted RBP11.84□□□□□ -0.51
RORA-209ENST00000559145 STX6O43752 255 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 FDX1P10109 184 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 PDIA4P13667 645 aaKnown RBP11.84□□□□□ -0.51
RORA-209ENST00000559145 NLRP5P59047 1200 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 NUCB2P80303 420 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 TRAF1Q13077 416 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 SAFBQ15424 915 aaKnown RBP eCLIP11.84□□□□□ -0.51
RORA-209ENST00000559145 PKN1Q16512 942 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 USH1GQ495M9 461 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 MCTP1Q6DN14 999 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 FBXO11Q86XK2 927 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 CCDC148Q8NFR7 591 aa11.84□□□□□ -0.51
RORA-209ENST00000559145 CCDC12Q8WUD4 166 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms