RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PRDM6Q9NQX0 595 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 WHRNQ9P202 907 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 PCOLCE2Q9UKZ9 415 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 MAPRE3Q9UPY8 281 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 DAGLAQ9Y4D2 1042 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 ZNF451Q9Y4E5 1061 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 PCDHB12Q9Y5F1 795 aa3.1□□□□□ -1.91
GABPB1-209ENST00000559100 A0A087X0B3 334 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 A0A0A0MRY4 1105 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 BLACEA4D250 179 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 FAM229AH3BQW9 127 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 MEIS1O00470 390 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 CBFA2T2O43439 604 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 KPNA6O60684 536 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 SNRPB2P08579 225 aaKnown RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 FGFR1P11362 822 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 NID1P14543 1247 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 SDSP20132 328 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 CD247P20963 164 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 RXRBP28702 533 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 NTF4P34130 210 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 ETV3P41162 512 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 ECI1P42126 302 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 TRIM28Q13263 835 aaKnown RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 SLBPQ14493 270 aaKnown RBP eCLIP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 SART3Q15020 963 aaKnown RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 LETMD1Q6P1Q0 360 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 KIAA1211Q6ZU35 1233 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 CDH24Q86UP0 819 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 FBXO11Q86XK2 927 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 C7orf61Q8IZ16 206 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 AHI1Q8N157 1196 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 AGGF1Q8N302 714 aaeCLIP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 FIBCD1Q8N539 461 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 MFSD2AQ8NA29 543 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 SMG8Q8ND04 991 aaKnown RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 KCTD13Q8WZ19 329 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 USP7Q93009 1102 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 KREMEN1Q96MU8 473 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 SMAD5Q99717 465 aaKnown RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 YIPF2Q9BWQ6 316 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 FAM126AQ9BYI3 521 aaPredicted RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 MRPL18Q9H0U6 180 aaKnown RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 ASCC2Q9H1I8 757 aaPredicted RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 TPSG1Q9NRR2 321 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 FAM105AQ9NUU6 356 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 SUSD2Q9UGT4 822 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 TPX2Q9ULW0 747 aaKnown RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 FAN1Q9Y2M0 1017 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 TNPO3Q9Y5L0 923 aaKnown RBP3.09□□□□□ -1.91
GABPB1-209ENST00000559100 ACTL7BQ9Y614 415 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 EID1Q9Y6B2 187 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 NCANO14594 1321 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 SYNGAP1Q96PV0 1343 aa3.09□□□□□ -1.91
GABPB1-209ENST00000559100 DNAJC25-GNG10A0A024R161 153 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 MEGF11A6BM72 1044 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GSG1L2A8MUP6 293 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 EFCAB14O75071 495 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 KATNA1O75449 491 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 LRIG2O94898 1065 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GLB1P16278 677 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 CYP7A1P22680 504 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 PMLP29590 882 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GABREP78334 506 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 ITKQ08881 620 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 DPY19L1Q2PZI1 675 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 CFAP100Q494V2 611 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 PRRT3Q5FWE3 981 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 CWF19L1Q69YN2 538 aaKnown RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 ANKRD34AQ69YU3 496 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GTF2IRD2BQ6EKJ0 949 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 USP53Q70EK8 1073 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 UBE2R2Q712K3 238 aaPredicted RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 BRAPQ7Z569 592 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 RNF180Q86T96 592 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GTF2IRD2Q86UP8 949 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 TRIM59Q8IWR1 403 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 FMR1NBQ8N0W7 255 aaPredicted RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 RIN3Q8TB24 985 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 DDX1Q92499 740 aaKnown RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 OSBP2Q969R2 916 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 MTMR8Q96EF0 704 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 MAGEB10Q96LZ2 347 aaPredicted RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 SLC52A2Q9HAB3 445 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 SUGCTQ9HAC7 445 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GP6Q9HCN6 339 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 INTS7Q9NVH2 962 aaKnown RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GFOD1Q9NXC2 390 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GABBR1Q9UBS5 961 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 CGGBP1Q9UFW8 167 aaPredicted RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 USP21Q9UK80 565 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 CEP131Q9UPN4 1083 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 GPR55Q9Y2T6 319 aaPredicted RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 SF3B6Q9Y3B4 125 aaKnown RBP3.08□□□□□ -1.92
GABPB1-209ENST00000559100 EMC9Q9Y3B6 208 aa3.08□□□□□ -1.92
GABPB1-209ENST00000559100 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 PIK3R2O00459 728 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 PRRG2O14669 202 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 TM4SF5O14894 197 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 PRC1O43663 620 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms