RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 CHMP6Q96FZ7 201 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 NRDE2Q9H7Z3 1164 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 RMND1Q9NWS8 449 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 GSTT1P30711 240 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 ZNF131P52739 623 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 COG7P83436 770 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 SF3A3Q12874 501 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRPM1-207ENST00000558445 CREB3L3Q68CJ9 461 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 VSIG1Q86XK7 387 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 ST13P4Q8IZP2 240 aaPredicted RBP11.12□□□□□ -0.63
TRPM1-207ENST00000558445 MYOCDQ8IZQ8 938 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
TRPM1-207ENST00000558445 DPF2Q92785 391 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 CASP10Q92851 521 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 FSD1Q9BTV5 496 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 GOLPH3LQ9H4A5 285 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 PCDHA7Q9UN72 937 aa11.12□□□□□ -0.63
TRPM1-207ENST00000558445 GNAT2P19087 354 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
TRPM1-207ENST00000558445 TNNC1P63316 161 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 HSP90AA5PQ58FG0 334 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 TC2NQ8N9U0 490 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 ZIM3Q96PE6 472 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 ECT2Q9H8V3 914 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 POLD4Q9HCU8 107 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 CEP126Q9P2H0 1117 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 RABL2BQ9UNT1 228 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 RFC5P40937 340 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 TMED10P49755 219 aaKnown RBP11.11□□□□□ -0.63
TRPM1-207ENST00000558445 RASSF2P50749 326 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 MTF1Q14872 753 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 ZNF554Q86TJ5 538 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 MAGEC2Q9UBF1 373 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-207ENST00000558445 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 PENKP01210 267 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-207ENST00000558445 KRT14P02533 472 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 STAT6P42226 847 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 PPP2R2AP63151 447 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 PDE1BQ01064 536 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 CYLC2Q14093 348 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-207ENST00000558445 THOC7Q6I9Y2 204 aaKnown RBP11.11□□□□□ -0.63
TRPM1-207ENST00000558445 IRGCQ6NXR0 463 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 LLPHQ9BRT6 129 aaKnown RBP11.11□□□□□ -0.63
TRPM1-207ENST00000558445 DKK3Q9UBP4 350 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 TMED5Q9Y3A6 229 aa11.11□□□□□ -0.63
TRPM1-207ENST00000558445 TCP1P17987 556 aaKnown RBP11.1□□□□□ -0.63
TRPM1-207ENST00000558445 RCN2Q14257 317 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 NFE2L2Q16236 605 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 C9orf84Q5VXU9 1444 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 RASGRP2Q7LDG7 609 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 ZNF570Q96NI8 536 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 RASAL2Q9UJF2 1139 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 KRT9P35527 623 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 DMPKQ09013 629 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 PAF1Q8N7H5 531 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 SH3GL1Q99961 368 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 LSG1Q9H089 658 aaKnown RBP11.1□□□□□ -0.63
TRPM1-207ENST00000558445 RAB17Q9H0T7 212 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 ITM2BQ9Y287 266 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
TRPM1-207ENST00000558445 EPN1Q9Y6I3 576 aaPredicted RBP11.1□□□□□ -0.63
TRPM1-207ENST00000558445 MAGEA13PA6NCF6 341 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 OPHN1O60890 802 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 POLR3DP05423 398 aaPredicted RBP11.1□□□□□ -0.63
TRPM1-207ENST00000558445 C6orf163Q5TEZ5 329 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRPM1-207ENST00000558445 RPS6KC1Q96S38 1066 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 KRT23Q9C075 422 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.1□□□□□ -0.63
TRPM1-207ENST00000558445 PTCH1Q13635 1447 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 KDRP35968 1356 aa11.1□□□□□ -0.63
TRPM1-207ENST00000558445 A6NHS1 94 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 E7ENQ6 273 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 DNM1LO00429 736 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 JAK2O60674 1132 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 SERPINB3P29508 390 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 MAGEA10P43363 369 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-207ENST00000558445 TRPM8Q7Z2W7 1104 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 FMR1NBQ8N0W7 255 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-207ENST00000558445 IQSEC3Q9UPP2 1182 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-207ENST00000558445 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 SBNO1A3KN83 1393 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 GUCY2DQ02846 1103 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 RBL2Q08999 1139 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 NCCRP1Q6ZVX7 275 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-207ENST00000558445 PCDH18Q9HCL0 1135 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 TXLNGQ9NUQ3 528 aa11.09□□□□□ -0.63
TRPM1-207ENST00000558445 RTEL1Q9NZ71 1219 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms