RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 MYO5AQ9Y4I1 1855 aaKnown RBP9.46□□□□□ -0.9
SPG11-209ENST00000558253 DLEC1Q9Y238 1755 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 KLRG2A4D1S0 409 aaPredicted RBP9.45□□□□□ -0.9
SPG11-209ENST00000558253 TK2O00142 265 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 ZSCAN12O43309 604 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 TOP1P11387 765 aaKnown RBP9.45□□□□□ -0.9
SPG11-209ENST00000558253 CDK11BP21127 795 aaKnown RBP9.45□□□□□ -0.9
SPG11-209ENST00000558253 PRDX5P30044 214 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 PRPHP41219 470 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 PPP1R2P41236 205 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 SPAG1Q07617 926 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 CFAP100Q494V2 611 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 FILIP1LQ4L180 1135 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 SPATA1Q5VX52 437 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 FAM196AQ6ZSG2 479 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 TMC6Q7Z403 805 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 FOXP4Q8IVH2 680 aaPredicted RBP9.45□□□□□ -0.9
SPG11-209ENST00000558253 VSTM4Q8IW00 320 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 BLIDQ8IZY5 108 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 CCDC82Q8N4S0 544 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 SRBD1Q8N5C6 995 aaKnown RBP9.45□□□□□ -0.9
SPG11-209ENST00000558253 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 SPZ1Q9BXG8 430 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 VPS54Q9P1Q0 977 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 SERTAD1Q9UHV2 236 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 PCDHA4Q9UN74 947 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 LY75O60449 1722 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 BTAF1O14981 1849 aa9.45□□□□□ -0.9
SPG11-209ENST00000558253 PALM3A6NDB9 673 aaPredicted RBP9.44□□□□□ -0.9
SPG11-209ENST00000558253 STX10O60499 249 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 PLEKHA8P1O95397 391 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 TSPY3P0CV98 308 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 TSPY8P0CW00 308 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 ZNF18P17022 549 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
SPG11-209ENST00000558253 GNA11P29992 359 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 NOVP48745 357 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 UTP14CQ5TAP6 766 aaKnown RBP9.44□□□□□ -0.9
SPG11-209ENST00000558253 MEX3CQ5U5Q3 659 aaKnown RBP9.44□□□□□ -0.9
SPG11-209ENST00000558253 RCSD1Q6JBY9 416 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 ANKRD20A12PQ8NF67 263 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 NEDD1Q8NHV4 660 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 PAGE5Q96GU1 130 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 AK8Q96MA6 479 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 NAA15Q9BXJ9 866 aaKnown RBP9.44□□□□□ -0.9
SPG11-209ENST00000558253 TMX1Q9H3N1 280 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 CD209Q9NNX6 404 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 FANCLQ9NW38 375 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 FAM205AQ6ZU69 1335 aa9.44□□□□□ -0.9
SPG11-209ENST00000558253 GAKO14976 1311 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 MYO3BQ8WXR4 1341 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 CYP2D7A0A087X1C5 515 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 ARHGAP6O43182 974 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 MAP3K7O43318 606 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 PRDM1O75626 825 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 KLRK1P26718 216 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 DPYDQ12882 1025 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 PTGDRQ13258 359 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 NPY5RQ15761 445 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 SPECC1LQ69YQ0 1117 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 PRR5LQ6MZQ0 368 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 C16orf86Q6ZW13 317 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 KRT25Q7Z3Z0 450 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 SP8Q8IXZ3 490 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 C17orf53Q8N3J3 647 aaPredicted RBP9.43□□□□□ -0.9
SPG11-209ENST00000558253 ERCC4Q92889 916 aaPredicted RBP9.43□□□□□ -0.9
SPG11-209ENST00000558253 CCDC47Q96A33 483 aaKnown RBP9.43□□□□□ -0.9
SPG11-209ENST00000558253 CCDC51Q96ER9 411 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 SRRTQ9BXP5 876 aaKnown RBP9.43□□□□□ -0.9
SPG11-209ENST00000558253 COA1Q9GZY4 146 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 TMX4Q9H1E5 349 aaPredicted RBP9.43□□□□□ -0.9
SPG11-209ENST00000558253 HSD3B7Q9H2F3 369 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 BARHL2Q9NY43 387 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 NFE2L3Q9Y4A8 694 aa9.43□□□□□ -0.9
SPG11-209ENST00000558253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
SPG11-209ENST00000558253 ESYT2A0FGR8 921 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 LRRC10BA6NIK2 292 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 UFL1O94874 794 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 SERPINB2P05120 415 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 TPM1P09493 284 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 USP17L8P0C7I0 530 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 COL9A1P20849 921 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 TUBB4BP68371 445 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 GPSM2P81274 684 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 TBX2Q13207 712 aaPredicted RBP9.42□□□□□ -0.9
SPG11-209ENST00000558253 TRIM14Q14142 442 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 NR1I3Q14994 352 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 ZNF174Q15697 407 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 SMYD5Q6GMV2 418 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 ARMCX5Q6P1M9 558 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 CMTR1Q8N1G2 835 aaKnown RBP9.42□□□□□ -0.9
SPG11-209ENST00000558253 FLAD1Q8NFF5 587 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 SH3RF3Q8TEJ3 882 aaPredicted RBP9.42□□□□□ -0.9
SPG11-209ENST00000558253 NOC3LQ8WTT2 800 aaKnown RBP9.42□□□□□ -0.9
SPG11-209ENST00000558253 ANKRD7Q92527 254 aa9.42□□□□□ -0.9
SPG11-209ENST00000558253 SYMPKQ92797 1274 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms