RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
RORA-207ENST00000558234 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
RORA-207ENST00000558234 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
RORA-207ENST00000558234 ASPRV1Q53RT3 343 aa13.36□□□□□ -0.27
RORA-207ENST00000558234 TMTC3Q6ZXV5 915 aa13.36□□□□□ -0.27
RORA-207ENST00000558234 MORF4L1Q9UBU8 362 aa13.36□□□□□ -0.27
RORA-207ENST00000558234 KIAA1217Q5T5P2 1943 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 TRIM75PA6NK02 468 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
RORA-207ENST00000558234 MPHOSPH10O00566 681 aaKnown RBP13.35□□□□□ -0.27
RORA-207ENST00000558234 PPP1R11O60927 126 aaPredicted RBP13.35□□□□□ -0.27
RORA-207ENST00000558234 AOC2O75106 756 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 UBAC1Q9BSL1 405 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 SAGE1Q9NXZ1 904 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 NOGQ13253 232 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 FASTKD5Q7L8L6 764 aaKnown RBP13.35□□□□□ -0.27
RORA-207ENST00000558234 SRBD1Q8N5C6 995 aaKnown RBP13.35□□□□□ -0.27
RORA-207ENST00000558234 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 BCRP11274 1271 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 DSG3P32926 999 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 PPP2R5BQ15173 497 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 SLFN13Q68D06 897 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 PPP1R9AQ9ULJ8 1098 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
RORA-207ENST00000558234 CAP1Q01518 475 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
RORA-207ENST00000558234 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 CALM1P0DP23 149 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 CALM2P0DP24 149 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 CALM3P0DP25 149 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 PKN1Q16512 942 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
RORA-207ENST00000558234 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 ZNF214Q9UL59 606 aaPredicted RBP13.34□□□□□ -0.27
RORA-207ENST00000558234 FAM83BQ5T0W9 1011 aa13.34□□□□□ -0.27
RORA-207ENST00000558234 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
RORA-207ENST00000558234 OPLAHO14841 1288 aa13.33□□□□□ -0.27
RORA-207ENST00000558234 STK3Q13188 491 aa13.33□□□□□ -0.27
RORA-207ENST00000558234 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.27
RORA-207ENST00000558234 GPATCH4Q5T3I0 446 aaKnown RBP13.33□□□□□ -0.27
RORA-207ENST00000558234 C17orf99Q6UX52 265 aa13.33□□□□□ -0.27
RORA-207ENST00000558234 GPT2Q8TD30 523 aa13.33□□□□□ -0.27
RORA-207ENST00000558234 BMP3P12645 472 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 IFNAR1P17181 557 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 TTBK2Q6IQ55 1244 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
RORA-207ENST00000558234 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 ABT1Q9ULW3 272 aaKnown RBP13.33□□□□□ -0.28
RORA-207ENST00000558234 MYH7BA7E2Y1 1941 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 PLEKHA8P1O95397 391 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 CCL15Q16663 113 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
RORA-207ENST00000558234 OAZ1P54368 228 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
RORA-207ENST00000558234 SART3Q15020 963 aaKnown RBP13.33□□□□□ -0.28
RORA-207ENST00000558234 MAF1Q9H063 256 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 TXNRD2Q9NNW7 524 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 RBPJLQ9UBG7 517 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 STX8Q9UNK0 236 aa13.33□□□□□ -0.28
RORA-207ENST00000558234 VWA5AO00534 786 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 NPY5RQ15761 445 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 R3HDMLQ9H3Y0 253 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 PDHXO00330 501 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
RORA-207ENST00000558234 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
RORA-207ENST00000558234 BTBD7Q9P203 1132 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 PRR12Q9ULL5 1215 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 ELP1O95163 1332 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 FRMPD4Q14CM0 1322 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 SREBF2Q12772 1141 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
RORA-207ENST00000558234 M0R2N6 131 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 CTGFP29279 349 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 LZTS2Q9BRK4 669 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 CATIPQ7Z7H3 387 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 GOLGA8BA8MQT2 603 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 ZBTB43O43298 467 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 TMEM132BQ14DG7 1078 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 KCTD1Q719H9 257 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 P2RX7Q99572 595 aaKnown RBP13.31□□□□□ -0.28
RORA-207ENST00000558234 WBP1LQ9NX94 342 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 SLC12A7Q9Y666 1083 aa13.31□□□□□ -0.28
RORA-207ENST00000558234 WDR81Q562E7 1941 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms