RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 REPS2Q8NFH8 660 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 APBA2Q99767 749 aa10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 CWC22Q9HCG8 908 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-206ENST00000558059 DNAH12Q6ZR08 3092 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 ZMYM6O95789 1325 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 VWA5AO00534 786 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 STRNO43815 780 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 ORC4O43929 436 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 RAD21O60216 631 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 TTLL1O95922 423 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 IGHA2P01877 340 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 TFRCP02786 760 aaKnown RBP10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 ZKSCAN1P17029 563 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 CAPN2P17655 700 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 CACNB2Q08289 660 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 PLS1Q14651 629 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 LRRC47Q8N1G4 583 aaKnown RBP10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 GMCL1P1Q8NEA9 526 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 NPLOC4Q8TAT6 608 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 HMX1Q9NP08 348 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 IL17RBQ9NRM6 502 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 FLRT1Q9NZU1 646 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 SYNPO2Q9UMS6 1093 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 IVNS1ABPQ9Y6Y0 642 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 ZNF236Q9UL36 1845 aa10.42□□□□□ -0.74
SNRPA1-206ENST00000558059 PLXNA1Q9UIW2 1896 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 NMT2O60551 498 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 COBLO75128 1261 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 FARP2O94887 1054 aaPredicted RBP10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 ADORA2AP29274 412 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 STAT3P40763 770 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 NOVP48745 357 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 CWC27Q6UX04 472 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 NCAPG2Q86XI2 1143 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 RIOX2Q8IUF8 465 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 PRPF38AQ8NAV1 312 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 SLF1Q9BQI6 1058 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 NBPF3Q9H094 633 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 MROH8Q9H579 483 aa10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 ZNF214Q9UL59 606 aaPredicted RBP10.41□□□□□ -0.74
SNRPA1-206ENST00000558059 TSPY2A6NKD2 308 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 HIP1O00291 1037 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 RANBP6O60518 1105 aaKnown RBP10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 SLC25A27O95847 323 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 GSPT1P15170 499 aaKnown RBP10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 CCND3P30281 292 aaPredicted RBP10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 MFAP1P55081 439 aaKnown RBP10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 HAND2P61296 217 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 TTC22Q5TAA0 569 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 SLFN13Q68D06 897 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 DPP9Q86TI2 863 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 ABRAQ8N0Z2 381 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 DIAPH3Q9NSV4 1193 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 ALPK3Q96L96 1907 aa10.4□□□□□ -0.74
SNRPA1-206ENST00000558059 TRIOBPQ9H2D6 2365 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 BMP3P12645 472 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 PPP4R3BQ5MIZ7 849 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 AKNAD1Q5T1N1 836 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 MFSD14CQ5VZR4 134 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 OLFML2BQ68BL8 750 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 TRPV1Q8NER1 839 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 GMCL1Q96IK5 515 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 PAWRQ96IZ0 340 aaKnown RBP10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 IL25Q9H293 177 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 SLC38A10Q9HBR0 1119 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 FEM1BQ9UK73 627 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 OGDHLQ9ULD0 1010 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 STX8Q9UNK0 236 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 RIPK3Q9Y572 518 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 LAMA4Q16363 1823 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 FRMPD3Q5JV73 1810 aa10.39□□□□□ -0.75
SNRPA1-206ENST00000558059 MCM3APO60318 1980 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 TMEM232C9JQI7 657 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 ATP2A1O14983 1001 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 ZBED4O75132 1171 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 FCER1AP12319 257 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 MCCP23508 829 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 CYP2C19P33261 490 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 ANKLE1Q8NAG6 615 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 DIS3LQ8TF46 1054 aaKnown RBP10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 STAG1Q8WVM7 1258 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 DSCC1Q9BVC3 393 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 TEX13BQ9BXU2 312 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 TOMM22Q9NS69 142 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 TCP11L1Q9NUJ3 509 aa10.38□□□□□ -0.75
SNRPA1-206ENST00000558059 RANBP2P49792 3224 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 PLA2G6O60733 806 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 PGK2P07205 417 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 PCP11498 1178 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 CYBAP13498 195 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 COPB2P35606 906 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 SLC1A4P43007 532 aa10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 SNRNP48Q6IEG0 339 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-206ENST00000558059 RCSD1Q6JBY9 416 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms