RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 VCPKMTQ9H867 229 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 CNNM2Q9H8M5 875 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 SENP2Q9HC62 589 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 SYNPO2Q9UMS6 1093 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 AGTPBP1Q9UPW5 1226 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 MYH6P13533 1939 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 PLXNB2O15031 1838 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 TTLL1O95922 423 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 HOXA7P31268 230 aaPredicted RBP10.63□□□□□ -0.71
CHD8-214ENST00000557727 SREBF2Q12772 1141 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
CHD8-214ENST00000557727 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 LRRC47Q8N1G4 583 aaKnown RBP10.63□□□□□ -0.71
CHD8-214ENST00000557727 IGDCC4Q8TDY8 1250 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 TMEM47Q9BQJ4 181 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 KRT23Q9C075 422 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 ZCCHC17Q9NP64 241 aaKnown RBP10.63□□□□□ -0.71
CHD8-214ENST00000557727 RNF186Q9NXI6 227 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 CLIP2Q9UDT6 1046 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 SLC45A1Q9Y2W3 748 aa10.63□□□□□ -0.71
CHD8-214ENST00000557727 TNKSO95271 1327 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 PDHXO00330 501 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 NDUFB10O96000 172 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 CAP1Q01518 475 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 EXOSC10Q01780 885 aaKnown RBP10.62□□□□□ -0.71
CHD8-214ENST00000557727 CRHR2Q13324 411 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 FASTKD5Q7L8L6 764 aaKnown RBP10.62□□□□□ -0.71
CHD8-214ENST00000557727 CHST3Q7LGC8 479 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 DGKHQ86XP1 1220 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 GMCL1P1Q8NEA9 526 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 NCOA7Q8NI08 942 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 ZSCAN10Q96SZ4 725 aaPredicted RBP10.62□□□□□ -0.71
CHD8-214ENST00000557727 ARHGEF10LQ9HCE6 1279 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 TOMM22Q9NS69 142 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 WDR70Q9NW82 654 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 SAGE1Q9NXZ1 904 aa10.62□□□□□ -0.71
CHD8-214ENST00000557727 ZNFX1Q9P2E3 1918 aaKnown RBP10.61□□□□□ -0.71
CHD8-214ENST00000557727 F5H6K3 240 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 SNHG28P0DPA3 235 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 CYP2C8P10632 490 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 CPA1P15085 419 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 USP14P54578 494 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 MAP2K1Q02750 393 aaPredicted RBP10.61□□□□□ -0.71
CHD8-214ENST00000557727 KLRC3Q07444 240 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 RNF20Q5VTR2 975 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 GADL1Q6ZQY3 521 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 CATSPERGQ6ZRH7 1159 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 LPAR1Q92633 364 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 TTC14Q96N46 770 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
CHD8-214ENST00000557727 KIF2CQ99661 725 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 FEZ1Q99689 392 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 ASCC2Q9H1I8 757 aaPredicted RBP10.61□□□□□ -0.71
CHD8-214ENST00000557727 LY9Q9HBG7 655 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 STX8Q9UNK0 236 aa10.61□□□□□ -0.71
CHD8-214ENST00000557727 WDR19Q8NEZ3 1342 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 LCTP09848 1927 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 SH2B2O14492 632 aaPredicted RBP10.6□□□□□ -0.71
CHD8-214ENST00000557727 FOXN1O15353 648 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 CA12O43570 354 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 PRC1O43663 620 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 PEX10O60683 326 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 TRPA1O75762 1119 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 TOP1P11387 765 aaKnown RBP10.6□□□□□ -0.71
CHD8-214ENST00000557727 ATP2B2Q01814 1243 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 TCEANC2Q96MN5 208 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 NEK1Q96PY6 1258 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 MTA3Q9BTC8 594 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 AGXT2Q9BYV1 514 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 RPAP3Q9H6T3 665 aaPredicted RBP10.6□□□□□ -0.71
CHD8-214ENST00000557727 SH2D4AQ9H788 454 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 ADAMTS5Q9UNA0 930 aa10.6□□□□□ -0.71
CHD8-214ENST00000557727 HTTP42858 3142 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 GRXCR2A6NFK2 248 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 WDR46O15213 610 aaKnown RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 CNMDO75829 334 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 TBC1D8O95759 1140 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 ALDH1A1P00352 501 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 HSPA1AP0DMV8 641 aaKnown RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 HSPA1BP0DMV9 641 aaKnown RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 HSPA8P11142 646 aaKnown RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 PDHBP11177 359 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 BCRP11274 1271 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 ZKSCAN1P17029 563 aaPredicted RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 MCM5P33992 734 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 TROAPQ12815 778 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 TRDNQ13061 729 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 SLC35G1Q2M3R5 365 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 NOM1Q5C9Z4 860 aaKnown RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 FAM83BQ5T0W9 1011 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 SLFN13Q68D06 897 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 LBX2Q6XYB7 198 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 DHX32Q7L7V1 743 aaKnown RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 RALYLQ86SE5 291 aaKnown RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 IQCA1Q86XH1 822 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 FBXL16Q8N461 479 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 GMCL1Q96IK5 515 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms