RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ZSWIM6Q9HCJ5 1215 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 CYP46A1Q9Y6A2 500 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 RLFQ13129 1914 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 PSMC4P43686 418 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 FGD1P98174 961 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 TROAPQ12815 778 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 IKQ13123 557 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-234ENST00000557703 CCDC96Q2M329 555 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 TKFCQ3LXA3 575 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 ADCK5Q3MIX3 580 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 RUFY3Q7L099 469 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 RIOX2Q8IUF8 465 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 ABRAQ8N0Z2 381 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 NKX2-3Q8TAU0 364 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 ATG4CQ96DT6 458 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 TEX13BQ9BXU2 312 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 AGXT2Q9BYV1 514 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 SLC12A7Q9Y666 1083 aa15.98■□□□□ 0.15
SHMT2-234ENST00000557703 FMNL1O95466 1100 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-234ENST00000557703 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
SHMT2-234ENST00000557703 STAT3P40763 770 aa15.97■□□□□ 0.15
SHMT2-234ENST00000557703 NFXL1Q6ZNB6 911 aa15.97■□□□□ 0.15
SHMT2-234ENST00000557703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHMT2-234ENST00000557703 CTCFLQ8NI51 663 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-234ENST00000557703 SOCS4Q8WXH5 440 aa15.97■□□□□ 0.15
SHMT2-234ENST00000557703 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
SHMT2-234ENST00000557703 NUP88Q99567 741 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-234ENST00000557703 PAGR1Q9BTK6 254 aa15.97■□□□□ 0.15
SHMT2-234ENST00000557703 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-234ENST00000557703 TXNRD2Q9NNW7 524 aa15.97■□□□□ 0.15
SHMT2-234ENST00000557703 FBXO40Q9UH90 709 aa15.97■□□□□ 0.15
SHMT2-234ENST00000557703 PALM3A6NDB9 673 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-234ENST00000557703 TNPO2O14787 897 aaKnown RBP15.96■□□□□ 0.15
SHMT2-234ENST00000557703 CNMDO75829 334 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 CASTP20810 708 aaKnown RBP15.96■□□□□ 0.15
SHMT2-234ENST00000557703 EVCP57679 992 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 SYDE2Q5VT97 1194 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 KCTD1Q719H9 257 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 OTOP1Q7RTM1 612 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 ZNF654Q8IZM8 581 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 CHST13Q8NET6 341 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 REPS2Q8NFH8 660 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 CD99L2Q8TCZ2 262 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 FBXO28Q9NVF7 368 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 BTBD7Q9P203 1132 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 SRRDQ9UH36 339 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 ZNF214Q9UL59 606 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-234ENST00000557703 PRR12Q9ULL5 1215 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
SHMT2-234ENST00000557703 IVNS1ABPQ9Y6Y0 642 aa15.96■□□□□ 0.15
SHMT2-234ENST00000557703 PARP14Q460N5 1801 aa15.96■□□□□ 0.14
SHMT2-234ENST00000557703 CCDC196A0A1B0GTZ2 297 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 IRF5Q13568 498 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 GRM4Q14833 912 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 TMEM132BQ14DG7 1078 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 ANKRD1Q15327 319 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 Q3C1V9 767 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 FBXO46Q6PJ61 603 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-234ENST00000557703 POTEEQ6S8J3 1075 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 CHST3Q7LGC8 479 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 TRMT44Q8IYL2 757 aaKnown RBP15.95■□□□□ 0.14
SHMT2-234ENST00000557703 TRIM47Q96LD4 638 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 RANBP17Q9H2T7 1088 aaKnown RBP15.95■□□□□ 0.14
SHMT2-234ENST00000557703 RBM28Q9NW13 759 aaKnown RBP15.95■□□□□ 0.14
SHMT2-234ENST00000557703 SLC5A4Q9NY91 659 aa15.95■□□□□ 0.14
SHMT2-234ENST00000557703 A0A0G2JMZ2 1700 aa15.94■□□□□ 0.14
SHMT2-234ENST00000557703 SLC15A5A6NIM6 579 aa15.94■□□□□ 0.14
SHMT2-234ENST00000557703 KLRF2D3W0D1 207 aa15.94■□□□□ 0.14
SHMT2-234ENST00000557703 ICAM1P05362 532 aa15.94■□□□□ 0.14
SHMT2-234ENST00000557703 XRCC5P13010 732 aaKnown RBP15.94■□□□□ 0.14
SHMT2-234ENST00000557703 PLEKHH3Q7Z736 793 aa15.94■□□□□ 0.14
SHMT2-234ENST00000557703 NUDT12Q9BQG2 462 aa15.94■□□□□ 0.14
SHMT2-234ENST00000557703 MOV10L1Q9BXT6 1211 aaKnown RBP15.94■□□□□ 0.14
SHMT2-234ENST00000557703 CWC22Q9HCG8 908 aaKnown RBP15.94■□□□□ 0.14
SHMT2-234ENST00000557703 MAD2L2Q9UI95 211 aa15.94■□□□□ 0.14
SHMT2-234ENST00000557703 TRIM17Q9Y577 477 aa15.94■□□□□ 0.14
SHMT2-234ENST00000557703 RBM25P49756 843 aaKnown RBP15.93■□□□□ 0.14
SHMT2-234ENST00000557703 PLS1Q14651 629 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 APOA5Q6Q788 366 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 GPR142Q7Z601 462 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 TEX2Q8IWB9 1127 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 SAMD3Q8N6K7 520 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 FANCBQ8NB91 859 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 PXYLP1Q8TE99 480 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 RIOX1Q9H6W3 641 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 GPCPD1Q9NPB8 672 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 MTMR7Q9Y216 660 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 PTPN22Q9Y2R2 807 aa15.93■□□□□ 0.14
SHMT2-234ENST00000557703 ZBTB43O43298 467 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 SEC24BO95487 1268 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 HOXC6P09630 235 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 FCER1AP12319 257 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 CAPN2P17655 700 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 ERCC3P19447 782 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 Q6ZUG5 572 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 NBPF11Q86T75 865 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 MTMR8Q96EF0 704 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 ZNF274Q96GC6 653 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-234ENST00000557703 SPZ1Q9BXG8 430 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms