RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 PTPRCP08575 1304 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 CIAO1O76071 339 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 CCND3P30281 292 aaPredicted RBP9.85□□□□□ -0.83
RD3L-201ENST00000557640 MECOMQ03112 1051 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 SPP2Q13103 211 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 C4orf48Q5BLP8 95 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 XP32Q5T750 250 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 DZIP1Q86YF9 867 aaKnown RBP9.85□□□□□ -0.83
RD3L-201ENST00000557640 CCDC155Q8N6L0 562 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
RD3L-201ENST00000557640 COA7Q96BR5 231 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 SCARF2Q96GP6 870 aaPredicted RBP9.85□□□□□ -0.83
RD3L-201ENST00000557640 PORCNQ9H237 461 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 MORF4L1Q9UBU8 362 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 DENND2AQ9ULE3 1009 aa9.85□□□□□ -0.83
RD3L-201ENST00000557640 LRRFIP2Q9Y608 721 aaKnown RBP9.85□□□□□ -0.83
RD3L-201ENST00000557640 PDS5AQ29RF7 1337 aaKnown RBP9.84□□□□□ -0.83
RD3L-201ENST00000557640 RPTORQ8N122 1335 aa9.84□□□□□ -0.83
RD3L-201ENST00000557640 REV3LO60673 3130 aa9.84□□□□□ -0.83
RD3L-201ENST00000557640 ARHGEF15O94989 841 aa9.84□□□□□ -0.83
RD3L-201ENST00000557640 OSBPL5Q9H0X9 879 aaPredicted RBP9.84□□□□□ -0.83
RD3L-201ENST00000557640 ABCF2Q9UG63 623 aa9.84□□□□□ -0.83
RD3L-201ENST00000557640 COL11A1P12107 1806 aaPredicted RBP9.84□□□□□ -0.83
RD3L-201ENST00000557640 GPR75-ASB3A0A0A6YYF3 556 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 CYP2B6P20813 491 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 FSHRP23945 695 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 CAP2P40123 477 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 CACNB2Q08289 660 aaPredicted RBP9.83□□□□□ -0.84
RD3L-201ENST00000557640 SH3D19Q5HYK7 790 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 TBC1D9Q6ZT07 1266 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 VWA5B2Q8N398 1253 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 ZNF280CQ8ND82 737 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 USP6NLQ92738 828 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 FAM161BQ96MY7 647 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 MEIS3Q99687 375 aa9.83□□□□□ -0.84
RD3L-201ENST00000557640 UBE2OQ9C0C9 1292 aaKnown RBP9.83□□□□□ -0.84
RD3L-201ENST00000557640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.83□□□□□ -0.84
RD3L-201ENST00000557640 HMX1Q9NP08 348 aaPredicted RBP9.83□□□□□ -0.84
RD3L-201ENST00000557640 MYH8P13535 1937 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 CDC14CA4D256 554 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 CNMDO75829 334 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 TIMM10P62072 90 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 TFCP2Q12800 502 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 DIEXFQ68CQ4 756 aaKnown RBP9.82□□□□□ -0.84
RD3L-201ENST00000557640 ADGRA1Q86SQ6 560 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.82□□□□□ -0.84
RD3L-201ENST00000557640 SH3RF3Q8TEJ3 882 aaPredicted RBP9.82□□□□□ -0.84
RD3L-201ENST00000557640 NSUN4Q96CB9 384 aaKnown RBP9.82□□□□□ -0.84
RD3L-201ENST00000557640 XAGE2Q96GT9 111 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 FLRT1Q9NZU1 646 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 HMG20BQ9P0W2 317 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 CEP126Q9P2H0 1117 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 PLXNA1Q9UIW2 1896 aa9.82□□□□□ -0.84
RD3L-201ENST00000557640 GBF1Q92538 1859 aa9.81□□□□□ -0.84
RD3L-201ENST00000557640 A0A1B0GUL7 405 aa9.81□□□□□ -0.84
RD3L-201ENST00000557640 UBTFL1P0CB47 393 aaPredicted RBP9.81□□□□□ -0.84
RD3L-201ENST00000557640 IL15P40933 162 aaPredicted RBP9.81□□□□□ -0.84
RD3L-201ENST00000557640 GCLCP48506 637 aaPredicted RBP9.81□□□□□ -0.84
RD3L-201ENST00000557640 HERVK_113P62684 666 aa9.81□□□□□ -0.84
RD3L-201ENST00000557640 SV2AQ7L0J3 742 aa9.81□□□□□ -0.84
RD3L-201ENST00000557640 VASH1Q7L8A9 365 aaPredicted RBP9.81□□□□□ -0.84
RD3L-201ENST00000557640 FAM9BQ8IZU0 186 aa9.81□□□□□ -0.84
RD3L-201ENST00000557640 P2RX7Q99572 595 aaKnown RBP9.81□□□□□ -0.84
RD3L-201ENST00000557640 COPRSQ9NQ92 184 aa9.81□□□□□ -0.84
RD3L-201ENST00000557640 GNL3LQ9NVN8 582 aaKnown RBP9.81□□□□□ -0.84
RD3L-201ENST00000557640 RBPJLQ9UBG7 517 aa9.81□□□□□ -0.84
RD3L-201ENST00000557640 CHD9Q3L8U1 2897 aa9.81□□□□□ -0.84
RD3L-201ENST00000557640 ZNFX1Q9P2E3 1918 aaKnown RBP9.8□□□□□ -0.84
RD3L-201ENST00000557640 USP17L5A8MUK1 530 aa9.8□□□□□ -0.84
RD3L-201ENST00000557640 CFAP99D6REC4 459 aa9.8□□□□□ -0.84
RD3L-201ENST00000557640 F12P00748 615 aaPredicted RBP9.8□□□□□ -0.84
RD3L-201ENST00000557640 ZKSCAN1P17029 563 aaPredicted RBP9.8□□□□□ -0.84
RD3L-201ENST00000557640 MCAMP43121 646 aa9.8□□□□□ -0.84
RD3L-201ENST00000557640 GPR142Q7Z601 462 aa9.8□□□□□ -0.84
RD3L-201ENST00000557640 ZGPATQ8N5A5 531 aaKnown RBP9.8□□□□□ -0.84
RD3L-201ENST00000557640 TRPV1Q8NER1 839 aa9.8□□□□□ -0.84
RD3L-201ENST00000557640 TNNQ9UQP3 1299 aa9.8□□□□□ -0.84
RD3L-201ENST00000557640 NDUFB9Q9Y6M9 179 aa9.8□□□□□ -0.84
RD3L-201ENST00000557640 FLT1P17948 1338 aa9.8□□□□□ -0.84
RD3L-201ENST00000557640 SMCHD1A6NHR9 2005 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 CAPN2P17655 700 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 ARID4AP29374 1257 aaPredicted RBP9.79□□□□□ -0.84
RD3L-201ENST00000557640 HOXA7P31268 230 aaPredicted RBP9.79□□□□□ -0.84
RD3L-201ENST00000557640 BACE1P56817 501 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 ERVK-9P63128 1117 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 ERVK-24P63145 666 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 C9orf50Q5SZB4 431 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 TEX11Q8IYF3 940 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 CCDC116Q8IYX3 515 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 SOCS4Q8WXH5 440 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 APBA2Q99767 749 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 PAGR1Q9BTK6 254 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 WDR18Q9BV38 432 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 SMC4Q9NTJ3 1288 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 ZBTB21Q9ULJ3 1066 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 CHD7Q9P2D1 2997 aa9.79□□□□□ -0.84
RD3L-201ENST00000557640 IGHA2P01877 340 aa9.78□□□□□ -0.84
RD3L-201ENST00000557640 XRCC5P13010 732 aaKnown RBP9.78□□□□□ -0.84
RD3L-201ENST00000557640 IRX3P78415 501 aaPredicted RBP9.78□□□□□ -0.84
RD3L-201ENST00000557640 SLFN5Q08AF3 891 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms