RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 NR1I2O75469 434 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 EGFRP00533 1210 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 MARCKSP29966 332 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-233ENST00000557529 KLRC3Q07444 240 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 APOBEC3FQ8IUX4 373 aaKnown RBP14.3□□□□□ -0.12
SHMT2-233ENST00000557529 KRI1Q8N9T8 703 aaKnown RBP14.3□□□□□ -0.12
SHMT2-233ENST00000557529 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 TNMDQ9H2S6 317 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 TSPY26PQ9H489 355 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 JMJD4Q9H9V9 463 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 HACL1Q9UJ83 578 aa14.3□□□□□ -0.12
SHMT2-233ENST00000557529 BAZ2BQ9UIF8 2168 aaKnown RBP14.3□□□□□ -0.12
SHMT2-233ENST00000557529 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
SHMT2-233ENST00000557529 CCDC194A0A1B0GVG4 234 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 KINO60870 393 aaKnown RBP14.29□□□□□ -0.12
SHMT2-233ENST00000557529 ASNSP08243 561 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 CAP2P40123 477 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 JAG1P78504 1218 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 MAP3K11Q16584 847 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 TYW1BQ6NUM6 668 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 KCTD1Q719H9 257 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 MIGA2Q7L4E1 593 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 ADGRF4Q8IZF3 695 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 ENGASEQ8NFI3 743 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 MTMR8Q96EF0 704 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 TEPSINQ96N21 525 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 PCDHB6Q9Y5E3 794 aa14.29□□□□□ -0.12
SHMT2-233ENST00000557529 SMCO2A6NFE2 343 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 M0R2N6 131 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 ZBTB5O15062 677 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 RAD21O60216 631 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 NDUFB10O96000 172 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 EARS2Q5JPH6 523 aaKnown RBP14.28□□□□□ -0.12
SHMT2-233ENST00000557529 TTC38Q5R3I4 469 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 DCAF15Q66K64 600 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 TTBK2Q6IQ55 1244 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 PIK3AP1Q6ZUJ8 805 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 KRT25Q7Z3Z0 450 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 DEFB129Q9H1M3 183 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 GOLPH3LQ9H4A5 285 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 TMX2Q9Y320 296 aa14.28□□□□□ -0.12
SHMT2-233ENST00000557529 FAM205CA6NFA0 338 aa14.27□□□□□ -0.12
SHMT2-233ENST00000557529 BMP3P12645 472 aa14.27□□□□□ -0.12
SHMT2-233ENST00000557529 ATP2B1P20020 1258 aa14.27□□□□□ -0.12
SHMT2-233ENST00000557529 PTPREP23469 700 aa14.27□□□□□ -0.12
SHMT2-233ENST00000557529 SNW1Q13573 536 aaKnown RBP14.27□□□□□ -0.12
SHMT2-233ENST00000557529 RBM43Q6ZSC3 357 aaKnown RBP14.27□□□□□ -0.12
SHMT2-233ENST00000557529 FMR1NBQ8N0W7 255 aaPredicted RBP14.27□□□□□ -0.12
SHMT2-233ENST00000557529 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.12
SHMT2-233ENST00000557529 GLT8D2Q9H1C3 349 aa14.27□□□□□ -0.12
SHMT2-233ENST00000557529 PCDHA6Q9UN73 950 aa14.27□□□□□ -0.12
SHMT2-233ENST00000557529 PCDHA8Q9Y5H6 950 aa14.27□□□□□ -0.12
SHMT2-233ENST00000557529 PPP2R3BQ9Y5P8 575 aa14.27□□□□□ -0.12
SHMT2-233ENST00000557529 FAM237AA0A1B0GTK4 181 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 A0A1B0GVL5 298 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 A0A1W2PRG0 241 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 USP17L10C9JJH3 530 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 LMOD1P29536 600 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-233ENST00000557529 SLC16A2P36021 539 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 ADCY7P51828 1080 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 RESP18Q5W5W9 173 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 BTNL9Q6UXG8 535 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 FERMT2Q96AC1 680 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 RNF181Q9P0P0 153 aa14.26□□□□□ -0.13
SHMT2-233ENST00000557529 FBXO2Q9UK22 296 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-233ENST00000557529 SRPRBQ9Y5M8 271 aaKnown RBP14.26□□□□□ -0.13
SHMT2-233ENST00000557529 PHF20L1A8MW92 1017 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 CTNND1O60716 968 aaKnown RBP14.25□□□□□ -0.13
SHMT2-233ENST00000557529 CCDC192P0DO97 292 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 XRCC6P12956 609 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-233ENST00000557529 PFKFB1P16118 471 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 YBX3P16989 372 aaKnown RBP eCLIP14.25□□□□□ -0.138e-8■□□□□ 9
SHMT2-233ENST00000557529 NDUFA8P51970 172 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 TRAF1Q13077 416 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 NONOQ15233 471 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-233ENST00000557529 CAMK4Q16566 473 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 NOM1Q5C9Z4 860 aaKnown RBP14.25□□□□□ -0.13
SHMT2-233ENST00000557529 SYDE2Q5VT97 1194 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 ANGEL2Q5VTE6 544 aaKnown RBP14.25□□□□□ -0.13
SHMT2-233ENST00000557529 REXO1Q8N1G1 1221 aaKnown RBP14.25□□□□□ -0.13
SHMT2-233ENST00000557529 TRPM4Q8TD43 1214 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 ACER1Q8TDN7 264 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 TIGD1Q96MW7 591 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 ZNF341Q9BYN7 854 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 FAM13BQ9NYF5 915 aa14.25□□□□□ -0.13
SHMT2-233ENST00000557529 ASTN2O75129 1339 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-233ENST00000557529 SBF1O95248 1867 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 TMEM232C9JQI7 657 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 EPS15P42566 896 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 ECE1P42892 770 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 MRPL12P52815 198 aaKnown RBP14.24□□□□□ -0.13
SHMT2-233ENST00000557529 ATP2C1P98194 919 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-233ENST00000557529 IKQ13123 557 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-233ENST00000557529 ORC2Q13416 577 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-233ENST00000557529 ZNF174Q15697 407 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 CDC37Q16543 378 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms