RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 KIAA0355O15063 1070 aa20.44■□□□□ 0.86
NEDD1-210ENST00000557400 PQBP1O60828 265 aaKnown RBP20.44■□□□□ 0.86
NEDD1-210ENST00000557400 ITGB8P26012 769 aa20.44■□□□□ 0.86
NEDD1-210ENST00000557400 GPATCH3Q96I76 525 aa20.44■□□□□ 0.86
NEDD1-210ENST00000557400 CDX2Q99626 313 aaPredicted RBP20.44■□□□□ 0.86
NEDD1-210ENST00000557400 TSEN34Q9BSV6 310 aaKnown RBP20.44■□□□□ 0.86
NEDD1-210ENST00000557400 SEMA6BQ9H3T3 888 aa20.44■□□□□ 0.86
NEDD1-210ENST00000557400 FAM184BQ9ULE4 1060 aa20.44■□□□□ 0.86
NEDD1-210ENST00000557400 DNAJC25-GNG10A0A024R161 153 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 RAG1P15918 1043 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 C20orf194Q5TEA3 1177 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 MAMDC4Q6UXC1 1216 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 ZNF287Q9HBT7 754 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 EPB41L4AQ9HCS5 686 aaPredicted RBP20.43■□□□□ 0.86
NEDD1-210ENST00000557400 CLIP2Q9UDT6 1046 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 RIPK3Q9Y572 518 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 SYNRGQ9UMZ2 1314 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 PARP14Q460N5 1801 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 MYH8P13535 1937 aa20.43■□□□□ 0.86
NEDD1-210ENST00000557400 IGKV6D-41A0A0C4DH26 115 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 RNF113AO15541 343 aaKnown RBP20.42■□□□□ 0.86
NEDD1-210ENST00000557400 GPAA1O43292 621 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 ZBED4O75132 1171 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 SNAI1O95863 264 aaPredicted RBP20.42■□□□□ 0.86
NEDD1-210ENST00000557400 ZFYP08048 801 aaPredicted RBP20.42■□□□□ 0.86
NEDD1-210ENST00000557400 GNAT2P19087 354 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 TDO2P48775 406 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 ACLYP53396 1101 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 ANKRD33Q7Z3H0 272 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 ZNF467Q7Z7K2 595 aaPredicted RBP20.42■□□□□ 0.86
NEDD1-210ENST00000557400 CPXCR1Q8N123 301 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 NUP133Q8WUM0 1156 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 RNPC3Q96LT9 517 aaKnown RBP20.42■□□□□ 0.86
NEDD1-210ENST00000557400 COL25A1Q9BXS0 654 aaPredicted RBP20.42■□□□□ 0.86
NEDD1-210ENST00000557400 STARD7Q9NQZ5 370 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 TMEM39AQ9NV64 488 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 ZHX1Q9UKY1 873 aaPredicted RBP20.42■□□□□ 0.86
NEDD1-210ENST00000557400 SYNPO2Q9UMS6 1093 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 CTDP1Q9Y5B0 961 aaPredicted RBP20.42■□□□□ 0.86
NEDD1-210ENST00000557400 UNC80Q8N2C7 3258 aa20.42■□□□□ 0.86
NEDD1-210ENST00000557400 CUL9Q8IWT3 2517 aa20.41■□□□□ 0.86
NEDD1-210ENST00000557400 MOXD2PA6NHM9 499 aa20.41■□□□□ 0.86
NEDD1-210ENST00000557400 EPHB4P54760 987 aa20.41■□□□□ 0.86
NEDD1-210ENST00000557400 TSHZ3Q63HK5 1081 aa20.41■□□□□ 0.86
NEDD1-210ENST00000557400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.41■□□□□ 0.86
NEDD1-210ENST00000557400 ZNF444Q8N0Y2 327 aaPredicted RBP20.41■□□□□ 0.86
NEDD1-210ENST00000557400 KLHDC9Q8NEP7 349 aa20.41■□□□□ 0.86
NEDD1-210ENST00000557400 KIFC2Q96AC6 838 aa20.41■□□□□ 0.86
NEDD1-210ENST00000557400 TOX2Q96NM4 488 aa20.41■□□□□ 0.86
NEDD1-210ENST00000557400 DCDC2CA8MYV0 355 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 DUSP11O75319 330 aaKnown RBP20.4■□□□□ 0.86
NEDD1-210ENST00000557400 PRDM1O75626 825 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 SLC4A3P48751 1232 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 FPGSQ05932 587 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 FAAP100Q0VG06 881 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 MAFAQ8NHW3 353 aaPredicted RBP20.4■□□□□ 0.86
NEDD1-210ENST00000557400 MKL1Q969V6 931 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 CEP95Q96GE4 821 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 GREB1LQ9C091 1923 aaPredicted RBP20.4■□□□□ 0.86
NEDD1-210ENST00000557400 TTYH1Q9H313 450 aaPredicted RBP20.4■□□□□ 0.86
NEDD1-210ENST00000557400 SLC38A10Q9HBR0 1119 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 RAVER2Q9HCJ3 691 aaKnown RBP20.4■□□□□ 0.86
NEDD1-210ENST00000557400 MTMR4Q9NYA4 1195 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 FBXO40Q9UH90 709 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 FEM1BQ9UK73 627 aa20.4■□□□□ 0.86
NEDD1-210ENST00000557400 TTLL1O95922 423 aa20.39■□□□□ 0.85
NEDD1-210ENST00000557400 APPP05067 770 aa20.39■□□□□ 0.85
NEDD1-210ENST00000557400 KCNA10Q16322 511 aa20.39■□□□□ 0.85
NEDD1-210ENST00000557400 CCSAPQ6IQ19 270 aaPredicted RBP20.39■□□□□ 0.85
NEDD1-210ENST00000557400 ANKRD35Q8N283 1001 aa20.39■□□□□ 0.85
NEDD1-210ENST00000557400 DCTPP1Q9H773 170 aa20.39■□□□□ 0.85
NEDD1-210ENST00000557400 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.39■□□□□ 0.85
NEDD1-210ENST00000557400 COL11A1P12107 1806 aaPredicted RBP20.39■□□□□ 0.85
NEDD1-210ENST00000557400 TMEM265A0A087WTH1 108 aa20.38■□□□□ 0.85
NEDD1-210ENST00000557400 M0R2C6 588 aa20.38■□□□□ 0.85
NEDD1-210ENST00000557400 CST5P28325 142 aaPredicted RBP20.38■□□□□ 0.85
NEDD1-210ENST00000557400 OAZ1P54368 228 aa20.38■□□□□ 0.85
NEDD1-210ENST00000557400 ACVR2BQ13705 512 aa20.38■□□□□ 0.85
NEDD1-210ENST00000557400 LRRFIP1Q32MZ4 808 aaKnown RBP20.38■□□□□ 0.85
NEDD1-210ENST00000557400 LRRC47Q8N1G4 583 aaKnown RBP20.38■□□□□ 0.85
NEDD1-210ENST00000557400 GMCL1P1Q8NEA9 526 aa20.38■□□□□ 0.85
NEDD1-210ENST00000557400 CHST13Q8NET6 341 aa20.38■□□□□ 0.85
NEDD1-210ENST00000557400 MYLIPQ8WY64 445 aa20.38■□□□□ 0.85
NEDD1-210ENST00000557400 ELP1O95163 1332 aa20.37■□□□□ 0.85
NEDD1-210ENST00000557400 MYADML2A6NDP7 307 aa20.37■□□□□ 0.85
NEDD1-210ENST00000557400 PATL2C9JE40 543 aaKnown RBP20.37■□□□□ 0.85
NEDD1-210ENST00000557400 C6orf222P0C671 652 aaPredicted RBP20.37■□□□□ 0.85
NEDD1-210ENST00000557400 FGD4Q96M96 766 aa20.37■□□□□ 0.85
NEDD1-210ENST00000557400 GLT1D1Q96MS3 346 aa20.37■□□□□ 0.85
NEDD1-210ENST00000557400 ABHD16BQ9H3Z7 469 aa20.37■□□□□ 0.85
NEDD1-210ENST00000557400 SPC25Q9HBM1 224 aa20.37■□□□□ 0.85
NEDD1-210ENST00000557400 TBX21Q9UL17 535 aa20.37■□□□□ 0.85
NEDD1-210ENST00000557400 PLIN4Q96Q06 1357 aa20.36■□□□□ 0.85
NEDD1-210ENST00000557400 MROH7Q68CQ1 1323 aa20.36■□□□□ 0.85
NEDD1-210ENST00000557400 MYH7P12883 1935 aa20.36■□□□□ 0.85
NEDD1-210ENST00000557400 IFNL3Q8IZI9 196 aa20.36■□□□□ 0.85
NEDD1-210ENST00000557400 PCSK9Q8NBP7 692 aaKnown RBP20.36■□□□□ 0.85
NEDD1-210ENST00000557400 NEDD1Q8NHV4 660 aa20.36■□□□□ 0.85
NEDD1-210ENST00000557400 NACAP1Q9BZK3 213 aa20.36■□□□□ 0.85
NEDD1-210ENST00000557400 ADCY6O43306 1168 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms