RNA–Protein interactions for RNA: ENST00000557065.1

COCH-211, Transcript of cochlin, humanhuman

TSL 5

Gene COCH, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-211ENST00000557065 FAM47AQ5JRC9 791 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 C1orf53Q5VUE5 145 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 FAM109BQ6ICB4 259 aaPredicted RBP9.72□□□□□ -0.85
COCH-211ENST00000557065 IFNL3Q8IZI9 196 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 CPXCR1Q8N123 301 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 REPS2Q8NFH8 660 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 PRDM5Q9NQX1 630 aaPredicted RBP9.72□□□□□ -0.85
COCH-211ENST00000557065 MTMR4Q9NYA4 1195 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 ZBTB47Q9UFB7 747 aaPredicted RBP9.72□□□□□ -0.85
COCH-211ENST00000557065 FEM1BQ9UK73 627 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 FAM184BQ9ULE4 1060 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 PHF24Q9UPV7 400 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 STXBP5LQ9Y2K9 1186 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 TACC3Q9Y6A5 838 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 DDX60LQ5H9U9 1706 aaKnown RBP9.72□□□□□ -0.85
COCH-211ENST00000557065 TTC41PQ6P2S7 1318 aa9.72□□□□□ -0.85
COCH-211ENST00000557065 M0R2C6 588 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 DLL1O00548 723 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 ATP2A1O14983 1001 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 ZNF865P0CJ78 1059 aaPredicted RBP9.71□□□□□ -0.86
COCH-211ENST00000557065 TSPY3P0CV98 308 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 TSPY8P0CW00 308 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 FDX1P10109 184 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 TAL1P17542 331 aaPredicted RBP9.71□□□□□ -0.86
COCH-211ENST00000557065 TFAP4Q01664 338 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 TLE2Q04725 743 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 SNX17Q15036 470 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 ANKRD35Q8N283 1001 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 NEDD1Q8NHV4 660 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 NUP133Q8WUM0 1156 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 BADQ92934 168 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 KIFC2Q96AC6 838 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 CEP95Q96GE4 821 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 TSEN34Q9BSV6 310 aaKnown RBP9.71□□□□□ -0.86
COCH-211ENST00000557065 FSD1Q9BTV5 496 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 RAVER2Q9HCJ3 691 aaKnown RBP9.71□□□□□ -0.86
COCH-211ENST00000557065 FBXO40Q9UH90 709 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 RIPK3Q9Y572 518 aa9.71□□□□□ -0.86
COCH-211ENST00000557065 IGKV6D-41A0A0C4DH26 115 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 POTEB2H3BUK9 544 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 SNAI1O95863 264 aaPredicted RBP9.7□□□□□ -0.86
COCH-211ENST00000557065 BMP3P12645 472 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 SHHQ15465 462 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 SLFN13Q68D06 897 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 MAMDC4Q6UXC1 1216 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 GMCL1P1Q8NEA9 526 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 CHST13Q8NET6 341 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 CHURC1Q8WUH1 139 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 NAPBQ9H115 298 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 SLC38A10Q9HBR0 1119 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 EPB41L4AQ9HCS5 686 aaPredicted RBP9.7□□□□□ -0.86
COCH-211ENST00000557065 ISY1Q9ULR0 285 aaKnown RBP9.7□□□□□ -0.86
COCH-211ENST00000557065 PCDHB15Q9Y5E8 787 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 ROBO3Q96MS0 1386 aa9.7□□□□□ -0.86
COCH-211ENST00000557065 DNAJC25-GNG10A0A024R161 153 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 TRIM43BA6NCK2 446 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 POTEMA6NI47 508 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 DCDC2CA8MYV0 355 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 TMEM232C9JQI7 657 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 DUSP11O75319 330 aaKnown RBP9.69□□□□□ -0.86
COCH-211ENST00000557065 CLTBP09497 229 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 MX1P20591 662 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 OAZ1P54368 228 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 PPARAQ07869 468 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 IKQ13123 557 aaPredicted RBP9.69□□□□□ -0.86
COCH-211ENST00000557065 LAMA3Q16787 3333 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 SH3RF1Q7Z6J0 888 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 ZNF467Q7Z7K2 595 aaPredicted RBP9.69□□□□□ -0.86
COCH-211ENST00000557065 NAV1Q8NEY1 1877 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 PI4K2BQ8TCG2 481 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 VTI1AQ96AJ9 217 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 TRIM43Q96BQ3 446 aaPredicted RBP9.69□□□□□ -0.86
COCH-211ENST00000557065 SEC62Q99442 399 aaKnown RBP9.69□□□□□ -0.86
COCH-211ENST00000557065 ABHD16BQ9H3Z7 469 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 SPC25Q9HBM1 224 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 PDLIM7Q9NR12 457 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 TMEM39AQ9NV64 488 aa9.69□□□□□ -0.86
COCH-211ENST00000557065 ZHX1Q9UKY1 873 aaPredicted RBP9.69□□□□□ -0.86
COCH-211ENST00000557065 ALPK3Q96L96 1907 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 A0A1W2PQ45 241 aaPredicted RBP9.68□□□□□ -0.86
COCH-211ENST00000557065 A0A1W2PQY0 241 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 MOXD2PA6NHM9 499 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 PQBP1O60828 265 aaKnown RBP9.68□□□□□ -0.86
COCH-211ENST00000557065 RAG1P15918 1043 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 MCCP23508 829 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 SLC1A4P43007 532 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 ACLYP53396 1101 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 ACVR2BQ13705 512 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 KCNA10Q16322 511 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 ZNF697Q5TEC3 545 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
COCH-211ENST00000557065 FAM160B2Q86V87 743 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 LRRC47Q8N1G4 583 aaKnown RBP9.68□□□□□ -0.86
COCH-211ENST00000557065 PCSK9Q8NBP7 692 aaKnown RBP9.68□□□□□ -0.86
COCH-211ENST00000557065 STAG1Q8WVM7 1258 aa9.68□□□□□ -0.86
COCH-211ENST00000557065 TOX2Q96NM4 488 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms