RNA–Protein interactions for RNA: ENST00000556903.2

FDPSP3-201, Transcript of farnesyl diphosphate synthase pseudogene 3, humanhuman

BASIC

Gene FDPSP3, Length 1,013 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPSP3-201ENST00000556903 TMX2Q9Y320 296 aa9.05□□□□□ -0.96
FDPSP3-201ENST00000556903 SIPA1L1O43166 1804 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 PALM3A6NDB9 673 aaPredicted RBP9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 KLRF2D3W0D1 207 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 PRPF3O43395 683 aaKnown RBP9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 PDHBP11177 359 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 XBP1P17861 261 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 SYT1P21579 422 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 SLC1A4P43007 532 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 CRHR2Q13324 411 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 TRIM29Q14134 588 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 CCDC96Q2M329 555 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 NOL9Q5SY16 702 aaKnown RBP9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 SLFN13Q68D06 897 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 ERO1BQ86YB8 467 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 CLEC10AQ8IUN9 316 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 SCYL3Q8IZE3 742 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 PHKBQ93100 1093 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 GMCL1Q96IK5 515 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 C8orf76Q96K31 380 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 FEZ1Q99689 392 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 ALG1Q9BT22 464 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 ELP3Q9H9T3 547 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 AS3MTQ9HBK9 375 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 MAD2L2Q9UI95 211 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 MTMR7Q9Y216 660 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 ATP6V1DQ9Y5K8 247 aa9.04□□□□□ -0.96
FDPSP3-201ENST00000556903 MYH8P13535 1937 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 CCL15-CCL14A0A0B4J2E2 113 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 VPS37CA5D8V6 355 aaPredicted RBP9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 F5H6K3 240 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 RAD21O60216 631 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 PLEKHA8P1O95397 391 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 BRD1O95696 1058 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 ZSCAN22P10073 491 aaPredicted RBP9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 CETPP11597 493 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 FDPSP14324 419 aaKnown RBP9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 INPP5BP32019 993 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 USP14P54578 494 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 SOX10P56693 466 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 JAG1P78504 1218 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 SP3Q02447 781 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 KLRC3Q07444 240 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 ZNF543Q08ER8 600 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 FUT2Q10981 343 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 ARHGEF6Q15052 776 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 CCL15Q16663 113 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 SHROOM1Q2M3G4 852 aaPredicted RBP9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 USP17L2Q6R6M4 530 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 OTOP1Q7RTM1 612 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 NBPF11Q86T75 865 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 SIAH1Q8IUQ4 282 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 FAM177A1Q8N128 213 aaPredicted RBP9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 CCDC82Q8N4S0 544 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 PTPN18Q99952 460 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 SPZ1Q9BXG8 430 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 ISY1Q9ULR0 285 aaKnown RBP9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 SNCAIPQ9Y6H5 919 aa9.03□□□□□ -0.96
FDPSP3-201ENST00000556903 MKI67P46013 3256 aaKnown RBP9.02□□□□□ -0.96
FDPSP3-201ENST00000556903 GREB1LQ9C091 1923 aaPredicted RBP9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 NDUFB10O96000 172 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 GOLGA8HP0CJ92 632 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 PPATQ06203 517 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 PPIL2Q13356 520 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 SNAPC2Q13487 334 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 SAFBQ15424 915 aaKnown RBP eCLIP9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 STAG2Q8N3U4 1231 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 FBXO18Q8NFZ0 1043 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 ACER1Q8TDN7 264 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 BRI3BPQ8WY22 251 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 LPAR1Q92633 364 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 RRP36Q96EU6 259 aaKnown RBP9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 OTUD5Q96G74 571 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 GBP4Q96PP9 640 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 KIAA1683Q9H0B3 1180 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 ZSCAN16Q9H4T2 348 aaPredicted RBP9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 VCPKMTQ9H867 229 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 ZFYVE28Q9HCC9 887 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 SEC63Q9UGP8 760 aaKnown RBP9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 TRIM17Q9Y577 477 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 CNTNAP5Q8WYK1 1306 aa9.02□□□□□ -0.97
FDPSP3-201ENST00000556903 A0A1W2PRG0 241 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 C19orf81C9J6K1 198 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 USP17L10C9JJH3 530 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 hCG_1984214I3L0E3 225 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 CEP290O15078 2479 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 PLA2G6O60733 806 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 BMP3P12645 472 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 SCG2P13521 617 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 PTPRAP18433 802 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 TRAF1Q13077 416 aa9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 TAF1CQ15572 869 aaPredicted RBP9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 CMTR1Q8N1G2 835 aaKnown RBP9.01□□□□□ -0.97
FDPSP3-201ENST00000556903 ZNF713Q8N859 430 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms