RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 KAT14Q9H8E8 782 aa12.4□□□□□ -0.42
MTHFD1-214ENST00000556771 ISY1Q9ULR0 285 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-214ENST00000556771 CTDP1Q9Y5B0 961 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-214ENST00000556771 TNKSO95271 1327 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 DOCK3Q8IZD9 2030 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 SLC15A5A6NIM6 579 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 TMEM232C9JQI7 657 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 SLC27A2O14975 620 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 EIF5BO60841 1220 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 ZBED4O75132 1171 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 MCCP23508 829 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 GRK4P32298 578 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 TMEM132BQ14DG7 1078 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 CCDC96Q2M329 555 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 GPATCH4Q5T3I0 446 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 CREB3L3Q68CJ9 461 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 RIOX2Q8IUF8 465 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 ENAHQ8N8S7 591 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 KIFC2Q96AC6 838 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 ZKSCAN3Q9BRR0 538 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 MOV10L1Q9BXT6 1211 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 TEX13BQ9BXU2 312 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 GJD2Q9UKL4 321 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
MTHFD1-214ENST00000556771 CCDC85CA6NKD9 419 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 ADCY3O60266 1144 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 PDHBP11177 359 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 PTPREP23469 700 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 STAT3P40763 770 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 RGS2P41220 211 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 KRT32Q14532 448 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 PLS1Q14651 629 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 TSGA10IPQ3SY00 556 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 IFIT1BQ5T764 474 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 WDR78Q5VTH9 848 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 BTNL9Q6UXG8 535 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 ABRAQ8N0Z2 381 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 PNMA1Q8ND90 353 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 REPS2Q8NFH8 660 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 APBA2Q99767 749 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 SLC38A10Q9HBR0 1119 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 PNMA2Q9UL42 364 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 ZNF214Q9UL59 606 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 ZNF236Q9UL36 1845 aa12.38□□□□□ -0.43
MTHFD1-214ENST00000556771 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 IFIT3O14879 490 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 PEX10O60683 326 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 ERCC3P19447 782 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 UBXN2AP68543 259 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 ZNF543Q08ER8 600 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 GRB14Q14449 540 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 SEC23AQ15436 765 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 ASPRV1Q53RT3 343 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 MORN1Q5T089 497 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 STOX1Q6ZVD7 989 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 KCTD1Q719H9 257 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 CYB5R4Q7L1T6 521 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 NCAPG2Q86XI2 1143 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 MB21D2Q8IYB1 491 aaPredicted RBP12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 NKX2-3Q8TAU0 364 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 USP6NLQ92738 828 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 ZNF333Q96JL9 665 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 SLC5A4Q9NY91 659 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 FBXO40Q9UH90 709 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 PLXNB2O15031 1838 aa12.37□□□□□ -0.43
MTHFD1-214ENST00000556771 HOXC6P09630 235 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 FCER1AP12319 257 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 CAPN2P17655 700 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 MCM5P33992 734 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 WTAPQ15007 396 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 TKFCQ3LXA3 575 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 SYDE2Q5VT97 1194 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 SNRNP48Q6IEG0 339 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 TMTC2Q8N394 836 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 BIN2Q9UBW5 565 aaPredicted RBP12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 CIZ1Q9ULV3 898 aaPredicted RBP12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 TAF6LQ9Y6J9 622 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 WDR19Q8NEZ3 1342 aa12.36□□□□□ -0.43
MTHFD1-214ENST00000556771 HMGCRP04035 888 aa12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 HMGB1P09429 215 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 KCTD2Q14681 263 aa12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 TMEM67Q5HYA8 995 aa12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 CHST13Q8NET6 341 aa12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 SH3TC2Q8TF17 1288 aa12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 KCNB2Q92953 911 aa12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 TMEM106CQ9BVX2 250 aa12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 FRMPD2Q68DX3 1309 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-214ENST00000556771 RBBP6Q7Z6E9 1792 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-214ENST00000556771 PRC1O43663 620 aa12.34□□□□□ -0.43
MTHFD1-214ENST00000556771 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-214ENST00000556771 ELNP15502 786 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms