RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TEX13BQ9BXU2 312 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 OGDHLQ9ULD0 1010 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 STX8Q9UNK0 236 aa12.23□□□□□ -0.45
SHMT2-224ENST00000556737 LCTP09848 1927 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 TFRCP02786 760 aaKnown RBP12.22□□□□□ -0.45
SHMT2-224ENST00000556737 BMP3P12645 472 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 CYBAP13498 195 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 STAT3P40763 770 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 MFAP1P55081 439 aaKnown RBP12.22□□□□□ -0.45
SHMT2-224ENST00000556737 PPP4R3BQ5MIZ7 849 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 LHX8Q68G74 356 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 ANKLE1Q8NAG6 615 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 PRPF38AQ8NAV1 312 aaKnown RBP12.22□□□□□ -0.45
SHMT2-224ENST00000556737 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 MAML3Q96JK9 1138 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 DSCC1Q9BVC3 393 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 SLC38A10Q9HBR0 1119 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 FEM1BQ9UK73 627 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 RIPK3Q9Y572 518 aa12.22□□□□□ -0.45
SHMT2-224ENST00000556737 RAD50Q92878 1312 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 PCP11498 1178 aaKnown RBP12.21□□□□□ -0.45
SHMT2-224ENST00000556737 FCER1AP12319 257 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 COPB2P35606 906 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 STAT2P52630 851 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 RRP12Q5JTH9 1297 aaKnown RBP12.21□□□□□ -0.45
SHMT2-224ENST00000556737 AKNAD1Q5T1N1 836 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 SNRNP48Q6IEG0 339 aaKnown RBP12.21□□□□□ -0.45
SHMT2-224ENST00000556737 RCSD1Q6JBY9 416 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
SHMT2-224ENST00000556737 PAWRQ96IZ0 340 aaKnown RBP12.21□□□□□ -0.45
SHMT2-224ENST00000556737 MMP19Q99542 508 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 TCP11L1Q9NUJ3 509 aa12.21□□□□□ -0.45
SHMT2-224ENST00000556737 PFASO15067 1338 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 ZNF536O15090 1300 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 TMEM232C9JQI7 657 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 PLA2G6O60733 806 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 PGK2P07205 417 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 MCCP23508 829 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 SLC1A4P43007 532 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 OAZ1P54368 228 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 ZNF792Q3KQV3 632 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 DPP9Q86TI2 863 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 TMEM47Q9BQJ4 181 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 HTATIP2Q9BUP3 242 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 RAVER2Q9HCJ3 691 aaKnown RBP12.2□□□□□ -0.46
SHMT2-224ENST00000556737 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
SHMT2-224ENST00000556737 DNAJC25-GNG10A0A024R161 153 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 H0YGN5 161 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 TOP1P11387 765 aaKnown RBP12.19□□□□□ -0.46
SHMT2-224ENST00000556737 COL6A1P12109 1028 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 CHMLP26374 656 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 KCTD2Q14681 263 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 FAM160B2Q86V87 743 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 CPXCR1Q8N123 301 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 DCAF4Q8WV16 495 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 FGD4Q96M96 766 aa12.19□□□□□ -0.46
SHMT2-224ENST00000556737 RNF41Q9H4P4 317 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-224ENST00000556737 DDX20Q9UHI6 824 aaKnown RBP12.19□□□□□ -0.46
SHMT2-224ENST00000556737 CEP290O15078 2479 aa12.18□□□□□ -0.46
SHMT2-224ENST00000556737 ZNF213O14771 459 aa12.18□□□□□ -0.46
SHMT2-224ENST00000556737 ZBED4O75132 1171 aa12.18□□□□□ -0.46
SHMT2-224ENST00000556737 MFSD6Q6ZSS7 791 aa12.18□□□□□ -0.46
SHMT2-224ENST00000556737 NECAB2Q7Z6G3 386 aa12.18□□□□□ -0.46
SHMT2-224ENST00000556737 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
SHMT2-224ENST00000556737 DIS3Q9Y2L1 958 aaKnown RBP12.18□□□□□ -0.46
SHMT2-224ENST00000556737 RANBP2P49792 3224 aaKnown RBP12.18□□□□□ -0.46
SHMT2-224ENST00000556737 SNHG28P0DPA3 235 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 FDX1P10109 184 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 PDHBP11177 359 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 TAL1P17542 331 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-224ENST00000556737 NT5C2P49902 561 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 CCDC96Q2M329 555 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 PRAMEF19Q5SWL8 479 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 TTBK2Q6IQ55 1244 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 BTNL9Q6UXG8 535 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 SKAP1Q86WV1 359 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 CHURC1Q8WUH1 139 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 ESR2Q92731 530 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 C11orf49Q9H6J7 331 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 SLC5A4Q9NY91 659 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
SHMT2-224ENST00000556737 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 MCM3APO60318 1980 aa12.17□□□□□ -0.46
SHMT2-224ENST00000556737 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-224ENST00000556737 B4E1Z4 1266 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 SGSM2O43147 1006 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 SEPT4O43236 478 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 MSCO60682 206 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 KDM4AO75164 1064 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 SNAP25P60880 206 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 PTH1RQ03431 593 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-224ENST00000556737 IMMTQ16891 758 aaKnown RBP12.16□□□□□ -0.46
SHMT2-224ENST00000556737 CHST13Q8NET6 341 aa12.16□□□□□ -0.46
SHMT2-224ENST00000556737 DPF3Q92784 378 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms