RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
PRPF39-210ENST00000556718 DAGLBQ8NCG7 672 aa6.9□□□□□ -1.3
PRPF39-210ENST00000556718 TMEM74Q96NL1 305 aa6.9□□□□□ -1.3
PRPF39-210ENST00000556718 TLR3O15455 904 aaKnown RBP6.89□□□□□ -1.31
PRPF39-210ENST00000556718 PCBP3P57721 371 aaKnown RBP6.89□□□□□ -1.31
PRPF39-210ENST00000556718 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
PRPF39-210ENST00000556718 NBPF9Q3BBW0 867 aa6.89□□□□□ -1.31
PRPF39-210ENST00000556718 ARSHQ5FYA8 562 aa6.89□□□□□ -1.31
PRPF39-210ENST00000556718 REC114Q7Z4M0 266 aa6.89□□□□□ -1.31
PRPF39-210ENST00000556718 GOLM1Q8NBJ4 401 aa6.89□□□□□ -1.31
PRPF39-210ENST00000556718 LINC00116Q8NCU8 138 aa6.89□□□□□ -1.31
PRPF39-210ENST00000556718 KRTAP17-1Q9BYP8 105 aa6.89□□□□□ -1.31
PRPF39-210ENST00000556718 MINDY4BA8MYZ0 360 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 GARTP22102 1010 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 RTP1P59025 263 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 NFKB2Q00653 900 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 MPP2Q14168 576 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 SNAP47Q5SQN1 464 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 PRRT2Q7Z6L0 340 aaPredicted RBP6.88□□□□□ -1.31
PRPF39-210ENST00000556718 FBXO33Q7Z6M2 555 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 ZNF655Q8N720 491 aaPredicted RBP6.88□□□□□ -1.31
PRPF39-210ENST00000556718 MZB1Q8WU39 189 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 KIAA1522Q9P206 1035 aaPredicted RBP6.88□□□□□ -1.31
PRPF39-210ENST00000556718 KLHL14Q9P2G3 628 aa6.88□□□□□ -1.31
PRPF39-210ENST00000556718 SSU72P8A0A1W2PR75 194 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 PRAMEF1O95521 474 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 VAMP1P23763 118 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 POLR2BP30876 1174 aaKnown RBP6.87□□□□□ -1.31
PRPF39-210ENST00000556718 ERVFRD-1P60508 538 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 RNF4P78317 190 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 NBPF12Q5TAG4 269 aaPredicted RBP6.87□□□□□ -1.31
PRPF39-210ENST00000556718 TMC4Q7Z404 712 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 GGNQ86UU5 652 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 FAM129CQ86XR2 697 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 RELL1Q8IUW5 271 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 IGDCC3Q8IVU1 814 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 ADAM7Q9H2U9 754 aa6.87□□□□□ -1.31
PRPF39-210ENST00000556718 FADS2P1A8MWK0 482 aa6.86□□□□□ -1.31
PRPF39-210ENST00000556718 RAG1P15918 1043 aa6.86□□□□□ -1.31
PRPF39-210ENST00000556718 TCF3P15923 654 aa6.86□□□□□ -1.31
PRPF39-210ENST00000556718 CEBPAP49715 358 aaPredicted RBP6.86□□□□□ -1.31
PRPF39-210ENST00000556718 HSF5Q4G112 596 aaPredicted RBP6.86□□□□□ -1.31
PRPF39-210ENST00000556718 CNKSR3Q6P9H4 555 aa6.86□□□□□ -1.31
PRPF39-210ENST00000556718 DBX2Q6ZNG2 339 aa6.86□□□□□ -1.31
PRPF39-210ENST00000556718 LDHDQ86WU2 507 aa6.86□□□□□ -1.31
PRPF39-210ENST00000556718 ZNF512BQ96KM6 892 aaPredicted RBP6.86□□□□□ -1.31
PRPF39-210ENST00000556718 PRDM14Q9GZV8 571 aa6.86□□□□□ -1.31
PRPF39-210ENST00000556718 GPR55Q9Y2T6 319 aaPredicted RBP6.86□□□□□ -1.31
PRPF39-210ENST00000556718 CELA3BP08861 270 aa6.85□□□□□ -1.31
PRPF39-210ENST00000556718 NCKAP1LP55160 1127 aa6.85□□□□□ -1.31
PRPF39-210ENST00000556718 XPCQ01831 940 aaPredicted RBP6.85□□□□□ -1.31
PRPF39-210ENST00000556718 TMC6Q7Z403 805 aa6.85□□□□□ -1.31
PRPF39-210ENST00000556718 TP53I13Q8NBR0 393 aaPredicted RBP6.85□□□□□ -1.31
PRPF39-210ENST00000556718 CRELD1Q96HD1 420 aa6.85□□□□□ -1.31
PRPF39-210ENST00000556718 FCRL2Q96LA5 508 aaPredicted RBP6.85□□□□□ -1.31
PRPF39-210ENST00000556718 RAB3GAP1Q15042 981 aa6.84□□□□□ -1.31
PRPF39-210ENST00000556718 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
PRPF39-210ENST00000556718 BRMS1Q9HCU9 246 aa6.84□□□□□ -1.31
PRPF39-210ENST00000556718 IGSF5Q9NSI5 407 aa6.84□□□□□ -1.31
PRPF39-210ENST00000556718 TNFRSF10DQ9UBN6 386 aa6.84□□□□□ -1.31
PRPF39-210ENST00000556718 PCDHB14Q9Y5E9 798 aa6.84□□□□□ -1.31
PRPF39-210ENST00000556718 NUDT19A8MXV4 375 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 MEIS1O00470 390 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 SIGLEC6O43699 453 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 MPOP05164 745 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 TAGLNQ01995 201 aaKnown RBP6.83□□□□□ -1.32
PRPF39-210ENST00000556718 OVOS1Q6IE37 1185 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 GALNT18Q6P9A2 607 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 PWWP2AQ96N64 755 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.83□□□□□ -1.32
PRPF39-210ENST00000556718 ERVK13-1Q9NX77 482 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 GMIPQ9P107 970 aa6.83□□□□□ -1.32
PRPF39-210ENST00000556718 ABLIM1O14639 778 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 PRKCAP17252 672 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 CTSKP43235 329 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 FBXL19Q6PCT2 694 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 SLCO6A1Q86UG4 719 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 SP8Q8IXZ3 490 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 MRS2Q9HD23 443 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 COPRSQ9NQ92 184 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 KBTBD4Q9NVX7 518 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 PCDHA5Q9Y5H7 936 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 TAF6LQ9Y6J9 622 aa6.82□□□□□ -1.32
PRPF39-210ENST00000556718 WTIPA6NIX2 430 aaPredicted RBP6.81□□□□□ -1.32
PRPF39-210ENST00000556718 PWP1Q13610 501 aa6.81□□□□□ -1.32
PRPF39-210ENST00000556718 OLFML2BQ68BL8 750 aa6.81□□□□□ -1.32
PRPF39-210ENST00000556718 LINC01356Q8N9X3 169 aa6.81□□□□□ -1.32
PRPF39-210ENST00000556718 TNFRSF12AQ9NP84 129 aa6.81□□□□□ -1.32
PRPF39-210ENST00000556718 LUC7LQ9NQ29 371 aaKnown RBP6.81□□□□□ -1.32
PRPF39-210ENST00000556718 CHST7Q9NS84 486 aa6.81□□□□□ -1.32
PRPF39-210ENST00000556718 USP35Q9P2H5 1018 aa6.81□□□□□ -1.32
PRPF39-210ENST00000556718 BUB1BO60566 1050 aaPredicted RBP6.8□□□□□ -1.32
PRPF39-210ENST00000556718 ARL4AP40617 200 aa6.8□□□□□ -1.32
PRPF39-210ENST00000556718 CYP4F8P98187 520 aa6.8□□□□□ -1.32
PRPF39-210ENST00000556718 LAPTM5Q13571 262 aa6.8□□□□□ -1.32
PRPF39-210ENST00000556718 MLECQ14165 292 aa6.8□□□□□ -1.32
PRPF39-210ENST00000556718 CDCP2Q5VXM1 449 aa6.8□□□□□ -1.32
PRPF39-210ENST00000556718 NUP43Q8NFH3 380 aa6.8□□□□□ -1.32
PRPF39-210ENST00000556718 ATG4CQ96DT6 458 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms