RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 TBC1D2Q9BYX2 928 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 ZHX1Q9UKY1 873 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-242ENST00000556644 GTF3C3Q9Y5Q9 886 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 SCN5AQ14524 2016 aa5.35□□□□□ -1.55
ATXN3-242ENST00000556644 ROBO3Q96MS0 1386 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 KIF16BQ96L93 1317 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 DCDC2BA2VCK2 349 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 LINC01553A4QN01 128 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L15C9J2P7 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 C19orf81C9J6K1 198 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L13C9JLJ4 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L11C9JVI0 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L18D6R9N7 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L22D6RA61 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L17D6RBQ6 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L19D6RCP7 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L20D6RJB6 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 ADCY6O43306 1168 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 TBC1D12O60347 775 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 B4GALT4O60513 344 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 LDHBP07195 334 aaKnown RBP5.34□□□□□ -1.55
ATXN3-242ENST00000556644 ARP10275 920 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 CYP2C9P11712 490 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 ACTN1P12814 892 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 BTDP43251 543 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 ERVK-21P61565 698 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 BEX3Q00994 111 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L24Q0WX57 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 PLS1Q14651 629 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 NBPF20Q3BBV1 942 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 TIGD5Q53EQ6 642 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 USP17L2Q6R6M4 530 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 CXCL17Q6UXB2 119 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 G2E3Q7L622 706 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 NCAPG2Q86XI2 1143 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 BANK1Q8NDB2 785 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 FBXO22Q8NEZ5 403 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 WDR66Q8TBY9 1149 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 AGBL1Q96MI9 1066 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 TGS1Q96RS0 853 aaKnown RBP5.34□□□□□ -1.55
ATXN3-242ENST00000556644 CRBNQ96SW2 442 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 FTOQ9C0B1 505 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-242ENST00000556644 SLC5A4Q9NY91 659 aa5.34□□□□□ -1.55
ATXN3-242ENST00000556644 MYO7AQ13402 2215 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 GCN1Q92616 2671 aaKnown RBP5.33□□□□□ -1.56
ATXN3-242ENST00000556644 PTPRSQ13332 1948 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 NAV2Q8IVL1 2488 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 SOBPA7XYQ1 873 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 TBX10O75333 385 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 VCAM1P19320 739 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 PTGS1P23219 599 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 TMPOP42166 694 aaKnown RBP5.33□□□□□ -1.56
ATXN3-242ENST00000556644 KCNJ6P48051 423 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 PSMC6P62333 389 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 DEFB103AP81534 67 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 DMWDQ09019 674 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 SMAD4Q13485 552 aaKnown RBP5.33□□□□□ -1.56
ATXN3-242ENST00000556644 LRRC24Q50LG9 513 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 GNASQ5JWF2 1037 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 METTL24Q5JXM2 366 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 CATSPERGQ6ZRH7 1159 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 PHOSPHO2Q8TCD6 241 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 PPP1R13LQ8WUF5 828 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 MRPL38Q96DV4 380 aaKnown RBP5.33□□□□□ -1.56
ATXN3-242ENST00000556644 TINF2Q9BSI4 451 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 SPATC1LQ9H0A9 340 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 MBIPQ9NS73 344 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 ZBTB21Q9ULJ3 1066 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 CNPY2Q9Y2B0 182 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 PCDHGC5Q9Y5F6 944 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 R4GN57 208 aa5.33□□□□□ -1.56
ATXN3-242ENST00000556644 GRIN2DO15399 1336 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 LINC01565O15544 149 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 STRNO43815 780 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 LMNAP02545 664 aaKnown RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 PFKMP08237 780 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 ASNSP08243 561 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 ADRB1P08588 477 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 PRR29P0C7W0 189 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 KCNA4P22459 653 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 CST5P28325 142 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 GTF2F1P35269 517 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 ATXN1P54253 815 aaKnown RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 LMOD3Q0VAK6 560 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 ITGA7Q13683 1181 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 KIAA0319Q5VV43 1072 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 MAMSTRQ6ZN01 415 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 ZBTB33Q86T24 672 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 DZIP1Q86YF9 867 aaKnown RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 CRIPAKQ8N1N5 446 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 ZNF579Q8NAF0 562 aaKnown RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 PCSK9Q8NBP7 692 aaKnown RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 SHCBP1Q8NEM2 672 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 CYP2W1Q8TAV3 490 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 RPGRIP1Q96KN7 1286 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 RIPOR3Q96MK2 946 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 IGFLR1Q9H665 355 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 MYH16Q9H6N6 1097 aa5.32□□□□□ -1.56
ATXN3-242ENST00000556644 RPAP3Q9H6T3 665 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-242ENST00000556644 DNAJC18Q9H819 358 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms