RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 AKTIPQ9H8T0 292 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.33□□□□□ -1.24
CPSF2-205ENST00000556622 DDX49Q9Y6V7 483 aaKnown RBP7.33□□□□□ -1.24
CPSF2-205ENST00000556622 CACNA1FO60840 1977 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 PLEKHG2Q9H7P9 1386 aa7.33□□□□□ -1.24
CPSF2-205ENST00000556622 SHANK3Q9BYB0 1731 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 ITGB4P16144 1822 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 DLL1O00548 723 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 TEFQ10587 303 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 LCE4AQ5TA78 99 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 KIAA1211Q6ZU35 1233 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 TICAM2Q86XR7 235 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 ERC1Q8IUD2 1116 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 TSPYL6Q8N831 410 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 FLAD1Q8NFF5 587 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 IL17REQ8NFR9 667 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 MTFR1LQ9H019 292 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 MUC3BQ9H195 1237 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 SRA1Q9HD15 236 aaKnown RBP7.32□□□□□ -1.24
CPSF2-205ENST00000556622 DZANK1Q9NVP4 752 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 PKD1L3Q7Z443 1732 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 DOT1LQ8TEK3 1739 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 RREB1Q92766 1687 aa7.32□□□□□ -1.24
CPSF2-205ENST00000556622 EREGO14944 169 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 UBTFL1P0CB47 393 aaPredicted RBP7.31□□□□□ -1.24
CPSF2-205ENST00000556622 MSNP26038 577 aaKnown RBP7.31□□□□□ -1.24
CPSF2-205ENST00000556622 TERF1P54274 439 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 ATP8B2P98198 1209 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 SLC39A6Q13433 755 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 ITPK1Q13572 414 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 NUP188Q5SRE5 1749 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 COL23A1Q86Y22 540 aaPredicted RBP7.31□□□□□ -1.24
CPSF2-205ENST00000556622 TTC5Q8N0Z6 440 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 FAM184AQ8NB25 1140 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 RASSF4Q9H2L5 321 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 STAP2Q9UGK3 403 aa7.31□□□□□ -1.24
CPSF2-205ENST00000556622 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
CPSF2-205ENST00000556622 TM4SF5O14894 197 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 PHACTR2O75167 634 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 IGLV1-40P01703 118 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 XRCC6P12956 609 aaKnown RBP eCLIP7.3□□□□□ -1.24
CPSF2-205ENST00000556622 SDSP20132 328 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 SPINK2P20155 84 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 MX1P20591 662 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 POLD1P28340 1107 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 PDE1AP54750 535 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 ZNF445P59923 1031 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 ATP11AP98196 1134 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 SMIM5Q71RC9 77 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 NCAPG2Q86XI2 1143 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 MAP4K3Q8IVH8 894 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 SIRT2Q8IXJ6 389 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 CNTROBQ8N137 903 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 TMEM102Q8N9M5 508 aaPredicted RBP7.3□□□□□ -1.24
CPSF2-205ENST00000556622 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 IL17RAQ96F46 866 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 DMRTB1Q96MA1 342 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 POP1Q99575 1024 aaKnown RBP7.3□□□□□ -1.24
CPSF2-205ENST00000556622 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
CPSF2-205ENST00000556622 TRIM33Q9UPN9 1127 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.3□□□□□ -1.24
CPSF2-205ENST00000556622 RGPD3A6NKT7 1758 aaPredicted RBP7.3□□□□□ -1.24
CPSF2-205ENST00000556622 RGPD4Q7Z3J3 1758 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 MAP3K5Q99683 1374 aa7.3□□□□□ -1.24
CPSF2-205ENST00000556622 PNPLA7Q6ZV29 1317 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 WDR33Q9C0J8 1336 aaKnown RBP7.29□□□□□ -1.24
CPSF2-205ENST00000556622 DLG5Q8TDM6 1919 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 KDM6AO15550 1401 aaPredicted RBP7.29□□□□□ -1.24
CPSF2-205ENST00000556622 SMNDC1O75940 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPSF2-205ENST00000556622 BAG4O95429 457 aaKnown RBP7.29□□□□□ -1.24
CPSF2-205ENST00000556622 DDX58O95786 925 aaKnown RBP7.29□□□□□ -1.24
CPSF2-205ENST00000556622 EDN3P14138 238 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 NASPP49321 788 aaPredicted RBP7.29□□□□□ -1.24
CPSF2-205ENST00000556622 DCTN1Q14203 1278 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 SLC4A10Q6U841 1118 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 ADAMTSL4Q6UY14 1074 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 MCM10Q7L590 875 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 GALNT12Q8IXK2 581 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 KIF1BPQ96EK5 621 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 THUMPD2Q9BTF0 503 aaKnown RBP7.29□□□□□ -1.24
CPSF2-205ENST00000556622 DNAJC25Q9H1X3 360 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 KANSL3Q9P2N6 904 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 DCTN4Q9UJW0 460 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
CPSF2-205ENST00000556622 TTC41PQ6P2S7 1318 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 RPS6KA4O75676 772 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 RFC4P35249 363 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 PEAR1Q5VY43 1037 aaPredicted RBP7.28□□□□□ -1.24
CPSF2-205ENST00000556622 CEP135Q66GS9 1140 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 ZNF790Q6PG37 636 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 MTERF4Q7Z6M4 381 aaKnown RBP7.28□□□□□ -1.24
CPSF2-205ENST00000556622 ZDHHC13Q8IUH4 622 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 DNAJC10Q8IXB1 793 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 AGGF1Q8N302 714 aaeCLIP7.28□□□□□ -1.24
CPSF2-205ENST00000556622 IL22RA1Q8N6P7 574 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 NXPE3Q969Y0 559 aa7.28□□□□□ -1.24
CPSF2-205ENST00000556622 ZSCAN31Q96LW9 406 aaPredicted RBP7.28□□□□□ -1.24
CPSF2-205ENST00000556622 PPP1R9BQ96SB3 815 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms