RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DLGAP5Q15398 846 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 ASPRV1Q53RT3 343 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 CEP57L1Q8IYX8 460 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 OGFOD1Q8N543 542 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 COA7Q96BR5 231 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 CSRNP1Q96S65 589 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 RIOX1Q9H6W3 641 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 CCDC39Q9UFE4 941 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 SNHG28P0DPA3 235 aa20.89■□□□□ 0.94
SDR39U1-220ENST00000556548 ZNF543Q08ER8 600 aa20.89■□□□□ 0.94
SDR39U1-220ENST00000556548 FOXP4Q8IVH2 680 aaPredicted RBP20.89■□□□□ 0.94
SDR39U1-220ENST00000556548 DHX40Q8IX18 779 aaKnown RBP20.89■□□□□ 0.94
SDR39U1-220ENST00000556548 AOPEPQ8N6M6 819 aa20.89■□□□□ 0.94
SDR39U1-220ENST00000556548 SYMPKQ92797 1274 aaKnown RBP20.89■□□□□ 0.94
SDR39U1-220ENST00000556548 CAVIN2O95810 425 aa20.89■□□□□ 0.93
SDR39U1-220ENST00000556548 ATP2C1P98194 919 aaPredicted RBP20.89■□□□□ 0.93
SDR39U1-220ENST00000556548 DALRD3Q5D0E6 543 aaKnown RBP20.89■□□□□ 0.93
SDR39U1-220ENST00000556548 ZNF830Q96NB3 372 aaPredicted RBP20.89■□□□□ 0.93
SDR39U1-220ENST00000556548 GMLQ99445 158 aa20.89■□□□□ 0.93
SDR39U1-220ENST00000556548 ZNRF3Q9ULT6 936 aa20.89■□□□□ 0.93
SDR39U1-220ENST00000556548 SIPA1L1O43166 1804 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 A0A087X0B3 334 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 TRAPPC10P48553 1259 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 TGFB2P61812 414 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 JAG1P78504 1218 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 SOGA3Q5TF21 947 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 ZSCAN30Q86W11 494 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 ADGRF4Q8IZF3 695 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 DHX58Q96C10 678 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 ZMYND12Q9H0C1 365 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 VEZTQ9HBM0 779 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 HDAC9Q9UKV0 1011 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 BMP15O95972 392 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 NLRP12P59046 1061 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 IL17AQ16552 155 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 TATDN1Q6P1N9 297 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 FERMT2Q96AC1 680 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 TRIM5Q9C035 493 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 TMOD2Q9NZR1 351 aa20.88■□□□□ 0.93
SDR39U1-220ENST00000556548 ENTPD3O75355 529 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 PRR29P0C7W0 189 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 RRP1BQ14684 758 aaKnown RBP20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 DAGLBQ8NCG7 672 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 MTFR1LQ9H019 292 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 JMJD4Q9H9V9 463 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 C6orf50Q9HD87 102 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 BIN2Q9UBW5 565 aaPredicted RBP20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 ZNF70Q9UC06 446 aaPredicted RBP20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 SCAF8Q9UPN6 1271 aaKnown RBP20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 PCDHA5Q9Y5H7 936 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 NPM3O75607 178 aaKnown RBP20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 SMARCA1P28370 1054 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 CXCL9Q07325 125 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 ABCB5Q2M3G0 1257 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 HS1BP3Q53T59 392 aa20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 CCDC12Q8WUD4 166 aaPredicted RBP20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 NAT10Q9H0A0 1025 aaKnown RBP20.87■□□□□ 0.93
SDR39U1-220ENST00000556548 SHTN1A0MZ66 631 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 ICA1Q05084 483 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 JAKMIP3Q5VZ66 844 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 GALNT17Q6IS24 598 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 SIAH1Q8IUQ4 282 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 KANSL2Q9H9L4 492 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 TMEM260Q9NX78 707 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 TUBE1Q9UJT0 475 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 USP17L10C9JJH3 530 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 GH2P01242 217 aa20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 MSNP26038 577 aaKnown RBP20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 MDM2Q00987 491 aaPredicted RBP20.86■□□□□ 0.93
SDR39U1-220ENST00000556548 ACTN4O43707 911 aaKnown RBP20.85■□□□□ 0.93
SDR39U1-220ENST00000556548 CDC25AP30304 524 aa20.85■□□□□ 0.93
SDR39U1-220ENST00000556548 POSTNQ15063 836 aa20.85■□□□□ 0.93
SDR39U1-220ENST00000556548 CDAN1Q8IWY9 1227 aa20.85■□□□□ 0.93
SDR39U1-220ENST00000556548 GNA11P29992 359 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 CCDC125Q86Z20 511 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 C4orf32Q8N8J7 132 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 TAOK3Q9H2K8 898 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 TMEM60Q9H2L4 133 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.84■□□□□ 0.933e-31■■■■■ 27.4
SDR39U1-220ENST00000556548 BCS1LQ9Y276 419 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 PPP1R11O60927 126 aaPredicted RBP20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 SLC1A4P43007 532 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 AFMP43652 599 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 LETM2Q2VYF4 491 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 SLFN13Q68D06 897 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 TMEM179Q6ZVK1 233 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 NUP88Q99567 741 aaPredicted RBP20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 ATRNL1Q5VV63 1379 aa20.84■□□□□ 0.93
SDR39U1-220ENST00000556548 PSDA5PKW4 1024 aaPredicted RBP20.83■□□□□ 0.93
SDR39U1-220ENST00000556548 CASP1P29466 404 aa20.83■□□□□ 0.93
SDR39U1-220ENST00000556548 RBM26Q5T8P6 1007 aaKnown RBP20.83■□□□□ 0.93
SDR39U1-220ENST00000556548 TTC12Q9H892 705 aaPredicted RBP20.83■□□□□ 0.93
SDR39U1-220ENST00000556548 NYAP2Q9P242 653 aa20.83■□□□□ 0.93
SDR39U1-220ENST00000556548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.83■□□□□ 0.93
SDR39U1-220ENST00000556548 MORC2Q9Y6X9 1032 aaPredicted RBP20.83■□□□□ 0.93
SDR39U1-220ENST00000556548 ZNF75DP51815 510 aa20.83■□□□□ 0.92
SDR39U1-220ENST00000556548 GPATCH4Q5T3I0 446 aaKnown RBP20.83■□□□□ 0.92
SDR39U1-220ENST00000556548 DRC7Q8IY82 874 aa20.83■□□□□ 0.92
SDR39U1-220ENST00000556548 JDP2Q8WYK2 163 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms