RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 ADAMTS5Q9UNA0 930 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 NEDD4P46934 1319 aa13.63□□□□□ -0.23
SLIRP-205ENST00000556310 POTEFA5A3E0 1075 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 NMT2O60551 498 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 HMGCRP04035 888 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 INHAP05111 366 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 XRCC5P13010 732 aaKnown RBP13.62□□□□□ -0.23
SLIRP-205ENST00000556310 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-205ENST00000556310 IMMTQ16891 758 aaKnown RBP13.62□□□□□ -0.23
SLIRP-205ENST00000556310 MORN1Q5T089 497 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 WDR78Q5VTH9 848 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 SLFN13Q68D06 897 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 USP6NLQ92738 828 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 GMCL1Q96IK5 515 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 APBA2Q99767 749 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 MOV10L1Q9BXT6 1211 aaKnown RBP13.62□□□□□ -0.23
SLIRP-205ENST00000556310 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-205ENST00000556310 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 PDE4DIPQ5VU43 2346 aa13.62□□□□□ -0.23
SLIRP-205ENST00000556310 SLC15A5A6NIM6 579 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 VWA5AO00534 786 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 SGSM2O43147 1006 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 MYCP01106 439 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-205ENST00000556310 CENPBP07199 599 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-205ENST00000556310 BMP3P12645 472 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 CCL5P13501 91 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 PTPREP23469 700 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 RGS2P41220 211 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 GRB14Q14449 540 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 TMEM132BQ14DG7 1078 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 MTFR1Q15390 333 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 BMP2KLQ5H9B9 411 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 REPS2Q8NFH8 660 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 ESR2Q92731 530 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 FEM1BQ9UK73 627 aa13.61□□□□□ -0.23
SLIRP-205ENST00000556310 ZNFX1Q9P2E3 1918 aaKnown RBP13.6□□□□□ -0.23
SLIRP-205ENST00000556310 SLC25A27O95847 323 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 ZKSCAN1P17029 563 aaPredicted RBP13.6□□□□□ -0.23
SLIRP-205ENST00000556310 ERCC3P19447 782 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 CYP2B6P20813 491 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 COPB2P35606 906 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 SLC1A4P43007 532 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 MAP2K5Q13163 448 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 PLS1Q14651 629 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 SKAP1Q86WV1 359 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
SLIRP-205ENST00000556310 PRPF38AQ8NAV1 312 aaKnown RBP13.6□□□□□ -0.23
SLIRP-205ENST00000556310 TRIB2Q92519 343 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 MROH8Q9H579 483 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 PLXNA1Q9UIW2 1896 aa13.6□□□□□ -0.23
SLIRP-205ENST00000556310 ZNF214Q9UL59 606 aaPredicted RBP13.6□□□□□ -0.23
SLIRP-205ENST00000556310 HOXC6P09630 235 aa13.59□□□□□ -0.23
SLIRP-205ENST00000556310 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
SLIRP-205ENST00000556310 STAT2P52630 851 aa13.59□□□□□ -0.23
SLIRP-205ENST00000556310 RIOX2Q8IUF8 465 aa13.59□□□□□ -0.23
SLIRP-205ENST00000556310 RNF208Q9H0X6 261 aa13.59□□□□□ -0.23
SLIRP-205ENST00000556310 UNC93B1Q9H1C4 597 aa13.59□□□□□ -0.23
SLIRP-205ENST00000556310 CNNM2Q9H8M5 875 aa13.59□□□□□ -0.23
SLIRP-205ENST00000556310 FRMPD3Q5JV73 1810 aa13.59□□□□□ -0.23
SLIRP-205ENST00000556310 MKI67P46013 3256 aaKnown RBP13.58□□□□□ -0.24
SLIRP-205ENST00000556310 TMEM232C9JQI7 657 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 STRNO43815 780 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 PLA2G6O60733 806 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 KDM4AO75164 1064 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 GJB1P08034 283 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 EN2P19622 333 aaPredicted RBP13.58□□□□□ -0.24
SLIRP-205ENST00000556310 MCCP23508 829 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 STAT3P40763 770 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 ATN1P54259 1190 aaPredicted RBP13.58□□□□□ -0.24
SLIRP-205ENST00000556310 PTH1RQ03431 593 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 RCSD1Q6JBY9 416 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 FAM160B2Q86V87 743 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 IQCA1Q86XH1 822 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 NCAPG2Q86XI2 1143 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 ABRAQ8N0Z2 381 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 DCAF4Q8WV16 495 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 KIFC2Q96AC6 838 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 TTC14Q96N46 770 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 TEX13BQ9BXU2 312 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 KRT23Q9C075 422 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 SLC38A10Q9HBR0 1119 aa13.58□□□□□ -0.24
SLIRP-205ENST00000556310 ISY1Q9ULR0 285 aaKnown RBP13.58□□□□□ -0.24
SLIRP-205ENST00000556310 B4E1Z4 1266 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 ZBED4O75132 1171 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 FDX1P10109 184 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 ADORA2AP29274 412 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 GJA8P48165 433 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 OAZ1P54368 228 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 CCDC96Q2M329 555 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 CCDC178Q5BJE1 867 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 SNRNP48Q6IEG0 339 aaKnown RBP13.57□□□□□ -0.24
SLIRP-205ENST00000556310 RASGRP2Q7LDG7 609 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms