RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 NEDD1Q8NHV4 660 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 DDX11Q96FC9 970 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 CEP95Q96GE4 821 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 NUP88Q99567 741 aaPredicted RBP13.7□□□□□ -0.22
LRP1-209ENST00000555941 FSD1Q9BTV5 496 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 XPNPEP3Q9NQH7 507 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
LRP1-209ENST00000555941 FBXO40Q9UH90 709 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 PHF24Q9UPV7 400 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 CNPY2Q9Y2B0 182 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
LRP1-209ENST00000555941 PLIN4Q96Q06 1357 aa13.7□□□□□ -0.22
LRP1-209ENST00000555941 SYNGAP1Q96PV0 1343 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 DNAJC25-GNG10A0A024R161 153 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 AKR1A1P14550 325 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 ADCYAP1R1P41586 468 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 ANO1Q5XXA6 986 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 MAMDC4Q6UXC1 1216 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 STK11IPQ8N1F8 1099 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 DEFB123Q8N688 67 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 NAPBQ9H115 298 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 ATP11BQ9Y2G3 1177 aa13.69□□□□□ -0.22
LRP1-209ENST00000555941 PRDM1O75626 825 aa13.68□□□□□ -0.22
LRP1-209ENST00000555941 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
LRP1-209ENST00000555941 ZNF865P0CJ78 1059 aaPredicted RBP13.68□□□□□ -0.22
LRP1-209ENST00000555941 PPARAQ07869 468 aa13.68□□□□□ -0.22
LRP1-209ENST00000555941 FAM109BQ6ICB4 259 aaPredicted RBP13.68□□□□□ -0.22
LRP1-209ENST00000555941 CHST13Q8NET6 341 aa13.68□□□□□ -0.22
LRP1-209ENST00000555941 TSEN34Q9BSV6 310 aaKnown RBP13.68□□□□□ -0.22
LRP1-209ENST00000555941 PLA2G6O60733 806 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 BMP3P12645 472 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 TFAP4Q01664 338 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 SLFN13Q68D06 897 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 CPXCR1Q8N123 301 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 KIFC2Q96AC6 838 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 GMCL1Q96IK5 515 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 SEC62Q99442 399 aaKnown RBP13.67□□□□□ -0.22
LRP1-209ENST00000555941 FAM184BQ9ULE4 1060 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
LRP1-209ENST00000555941 TAL1P17542 331 aaPredicted RBP13.66□□□□□ -0.22
LRP1-209ENST00000555941 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
LRP1-209ENST00000555941 AAMPQ13685 434 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 TRIM60Q495X7 471 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 FAM160B2Q86V87 743 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 ANKRD35Q8N283 1001 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 OTUD7AQ8TE49 926 aaPredicted RBP13.66□□□□□ -0.22
LRP1-209ENST00000555941 FERMT2Q96AC1 680 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 MTMR10Q9NXD2 777 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 STXBP5LQ9Y2K9 1186 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 LTBP2Q14767 1821 aa13.66□□□□□ -0.22
LRP1-209ENST00000555941 SALL3Q9BXA9 1300 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 MOXD2PA6NHM9 499 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 ADAMTS4O75173 837 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 DUSP11O75319 330 aaKnown RBP13.65□□□□□ -0.22
LRP1-209ENST00000555941 SNAI1O95863 264 aaPredicted RBP13.65□□□□□ -0.22
LRP1-209ENST00000555941 PGK1P00558 417 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 STAT2P52630 851 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 TLE2Q04725 743 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 HDAC1Q13547 482 aaPredicted RBP13.65□□□□□ -0.22
LRP1-209ENST00000555941 ALX1Q15699 326 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 TKFCQ3LXA3 575 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 ANKRD45Q5TZF3 282 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 LRRC47Q8N1G4 583 aaKnown RBP13.65□□□□□ -0.22
LRP1-209ENST00000555941 NUP133Q8WUM0 1156 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 ABHD16BQ9H3Z7 469 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
LRP1-209ENST00000555941 PRDM5Q9NQX1 630 aaPredicted RBP13.65□□□□□ -0.22
LRP1-209ENST00000555941 PDLIM7Q9NR12 457 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 HELLSQ9NRZ9 838 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 ANAPC4Q9UJX5 808 aa13.65□□□□□ -0.22
LRP1-209ENST00000555941 A0A1W2PQ45 241 aaPredicted RBP13.64□□□□□ -0.23
LRP1-209ENST00000555941 A0A1W2PQY0 241 aa13.64□□□□□ -0.23
LRP1-209ENST00000555941 TMEM232C9JQI7 657 aa13.64□□□□□ -0.23
LRP1-209ENST00000555941 SLC1A4P43007 532 aa13.64□□□□□ -0.23
LRP1-209ENST00000555941 ACVR2BQ13705 512 aa13.64□□□□□ -0.23
LRP1-209ENST00000555941 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
LRP1-209ENST00000555941 KLHDC9Q8NEP7 349 aa13.64□□□□□ -0.23
LRP1-209ENST00000555941 TOX2Q96NM4 488 aa13.64□□□□□ -0.23
LRP1-209ENST00000555941 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.64□□□□□ -0.23
LRP1-209ENST00000555941 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
LRP1-209ENST00000555941 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
LRP1-209ENST00000555941 KIAA0355O15063 1070 aa13.63□□□□□ -0.23
LRP1-209ENST00000555941 ORC4O43929 436 aa13.63□□□□□ -0.23
LRP1-209ENST00000555941 CLTBP09497 229 aa13.63□□□□□ -0.23
LRP1-209ENST00000555941 FGRP09769 529 aa13.63□□□□□ -0.23
LRP1-209ENST00000555941 CST5P28325 142 aaPredicted RBP13.63□□□□□ -0.23
LRP1-209ENST00000555941 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
LRP1-209ENST00000555941 ACLYP53396 1101 aa13.63□□□□□ -0.23
LRP1-209ENST00000555941 Q7L0L9 218 aa13.63□□□□□ -0.23
LRP1-209ENST00000555941 ANKRD33Q7Z3H0 272 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms