RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 FAM50AQ14320 339 aaKnown RBP4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 GTF2IRD2BQ6EKJ0 949 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 LINC00114Q6XXX2 140 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 GTF2IRD2Q86UP8 949 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 AGGF1Q8N302 714 aaeCLIP4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 FIBCD1Q8N539 461 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 WHAMMQ8TF30 809 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 LEO1Q8WVC0 666 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 BRF1Q92994 677 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 POLR3GLQ9BT43 218 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 CEP41Q9BYV8 373 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 NKX2-4Q9H2Z4 354 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 NOL6Q9H6R4 1146 aaKnown RBP4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 THRAP3Q9Y2W1 955 aaKnown RBP4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 DAGLAQ9Y4D2 1042 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 TNPO3Q9Y5L0 923 aaKnown RBP4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 EID1Q9Y6B2 187 aa4.08□□□□□ -1.76
MTHFD1-212ENST00000555858 WASHC2CQ9Y4E1 1318 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 B4E1Z4 1266 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 FAM229AH3BQW9 127 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 ALDH1L1O75891 902 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 APPP05067 770 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 SCG5P05408 212 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 SNRPB2P08579 225 aaKnown RBP4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 CYP7A1P22680 504 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 KCNJ6P48051 423 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 GUCY2FP51841 1108 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 NEK4P51957 841 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 EPHB1P54762 984 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 AMPD2Q01433 879 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 PPP2R5DQ14738 602 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 DHCR24Q15392 516 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 SF1Q15637 639 aaKnown RBP4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 PRRT3Q5FWE3 981 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 ZNF787Q6DD87 383 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 PKN3Q6P5Z2 889 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 NECAB2Q7Z6G3 386 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 FGD2Q7Z6J4 655 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 STRA8Q7Z7C7 330 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 TMEM145Q8NBT3 493 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 EZH1Q92800 747 aaPredicted RBP4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 CCDC136Q96JN2 1154 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 COX4I2Q96KJ9 171 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 MAGEB10Q96LZ2 347 aaPredicted RBP4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 PSMG3-AS1Q96PY0 264 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 PRDM14Q9GZV8 571 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 SEMA6CQ9H3T2 930 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 PRDM10Q9NQV6 1147 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 CYP26B1Q9NR63 512 aa4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 SF3B6Q9Y3B4 125 aaKnown RBP4.07□□□□□ -1.76
MTHFD1-212ENST00000555858 ARID4BQ4LE39 1312 aaPredicted RBP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 BLACEA4D250 179 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 AQP7O14520 342 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 BRINP1O60477 761 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 NFICP08651 508 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 NAT1P18440 290 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 ITIH2P19823 946 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 STRN3Q13033 797 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 SNW1Q13573 536 aaKnown RBP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 ZNF460Q14592 562 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 PCBP1Q15365 356 aaKnown RBP eCLIP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 NTRK3Q16288 839 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 SLC35F1Q5T1Q4 408 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 RNF219Q5W0B1 726 aaPredicted RBP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 ZNF385CQ66K41 422 aaPredicted RBP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 STYK1Q6J9G0 422 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 CDPF1Q6NVV7 123 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 Q6ZS46 218 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 UBE2R2Q712K3 238 aaPredicted RBP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 WDR66Q8TBY9 1149 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 DCAF4Q8WV16 495 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 C1orf159Q96HA4 380 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 SCLYQ96I15 445 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 ZDHHC15Q96MV8 337 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 DSCC1Q9BVC3 393 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 AKTIPQ9H8T0 292 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 GEMIN8Q9NWZ8 242 aaKnown RBP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 GFOD1Q9NXC2 390 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 NOP53Q9NZM5 478 aaKnown RBP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 MKL2Q9ULH7 1088 aa4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 GPR55Q9Y2T6 319 aaPredicted RBP4.06□□□□□ -1.76
MTHFD1-212ENST00000555858 PHLDB1Q86UU1 1377 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 TCRBV16S1A1N1A0A5B0 115 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 GPR39O43194 453 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 SIGLEC6O43699 453 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 KPNA6O60684 536 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 KATNA1O75449 491 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 ALX3O95076 343 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 RASGRP1O95267 797 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 EOMESO95936 686 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 JMJD7P0C870 316 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 GLB1P16278 677 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 GMPRP36959 345 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 ECI1P42126 302 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 SNRPNP63162 240 aaKnown RBP4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 POU4F1Q01851 419 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 TTF1Q15361 905 aaPredicted RBP4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 PRSS53Q2L4Q9 553 aa4.05□□□□□ -1.76
MTHFD1-212ENST00000555858 UVSSAQ2YD98 709 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms