RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 PNMA6FA0A0J9YX94 578 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L15C9J2P7 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L13C9JLJ4 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L11C9JVI0 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L18D6R9N7 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L22D6RA61 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L17D6RBQ6 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L19D6RCP7 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L20D6RJB6 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 IRF6O14896 467 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 STX6O43752 255 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 ZBTB48P10074 688 aaPredicted RBP13.43□□□□□ -0.26
APEX1-210ENST00000555414 SCG2P13521 617 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
APEX1-210ENST00000555414 VCAM1P19320 739 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 SYT1P21579 422 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 GTF2A2P52657 109 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 USP17L24Q0WX57 530 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 SAFBQ15424 915 aaKnown RBP eCLIP13.43□□□□□ -0.26
APEX1-210ENST00000555414 PFKFB3Q16875 520 aaPredicted RBP13.43□□□□□ -0.26
APEX1-210ENST00000555414 TTBK2Q6IQ55 1244 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 PRPF38AQ8NAV1 312 aaKnown RBP13.43□□□□□ -0.26
APEX1-210ENST00000555414 ZNF784Q8NCA9 323 aaPredicted RBP13.43□□□□□ -0.26
APEX1-210ENST00000555414 NUP88Q99567 741 aaPredicted RBP13.43□□□□□ -0.26
APEX1-210ENST00000555414 SLF1Q9BQI6 1058 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
APEX1-210ENST00000555414 BRMS1Q9HCU9 246 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 SH3GLB2Q9NR46 395 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 HOXC10Q9NYD6 342 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 MYH4Q9Y623 1939 aa13.43□□□□□ -0.26
APEX1-210ENST00000555414 A0A0G2JLL6 359 aaPredicted RBP13.42□□□□□ -0.26
APEX1-210ENST00000555414 ZBTB5O15062 677 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 FLOT1O75955 427 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 CETPP11597 493 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 SLC16A2P36021 539 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 PRRT2Q7Z6L0 340 aaPredicted RBP13.42□□□□□ -0.26
APEX1-210ENST00000555414 HOMER1Q86YM7 354 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 CCDC148Q8NFR7 591 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 JMJD4Q9H9V9 463 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 ATP6V1DQ9Y5K8 247 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 ATAD5Q96QE3 1844 aa13.42□□□□□ -0.26
APEX1-210ENST00000555414 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
APEX1-210ENST00000555414 TMEM88BA6NKF7 163 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 CYTH3O43739 400 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 ZBED4O75132 1171 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 CALML3P27482 149 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 DDIT3P35638 169 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 ZNF157P51786 506 aaPredicted RBP13.41□□□□□ -0.26
APEX1-210ENST00000555414 GNL2Q13823 731 aaKnown RBP13.41□□□□□ -0.26
APEX1-210ENST00000555414 COG2Q14746 738 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 KIAA1755Q5JYT7 1200 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 GALNT17Q6IS24 598 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 GADL1Q6ZQY3 521 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 HEATR3Q7Z4Q2 680 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 FBXO18Q8NFZ0 1043 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 KIFC2Q96AC6 838 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 WNK4Q96J92 1243 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 PIGSQ96S52 555 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 ABT1Q9ULW3 272 aaKnown RBP13.41□□□□□ -0.26
APEX1-210ENST00000555414 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
APEX1-210ENST00000555414 OSBPP22059 807 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 CATSPERGQ6ZRH7 1159 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 RASGRP2Q7LDG7 609 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 SAPCD2Q86UD0 394 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 CCDC102AQ96A19 550 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 MTMR8Q96EF0 704 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 HHIPL1Q96JK4 782 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 GLT8D2Q9H1C3 349 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 TLL2Q9Y6L7 1015 aa13.4□□□□□ -0.26
APEX1-210ENST00000555414 hCG_1642624A0A1W2PR95 340 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 ZSCAN22P10073 491 aaPredicted RBP13.39□□□□□ -0.27
APEX1-210ENST00000555414 GNA11P29992 359 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 HOXA7P31268 230 aaPredicted RBP13.39□□□□□ -0.27
APEX1-210ENST00000555414 NLRP5P59047 1200 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
APEX1-210ENST00000555414 PKN1Q16512 942 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 CDC37Q16543 378 aaPredicted RBP13.39□□□□□ -0.27
APEX1-210ENST00000555414 SPRYD7Q5W111 196 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 KRT40Q6A162 431 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 RGMBQ6NW40 437 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 PPP1R18Q6NYC8 613 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
APEX1-210ENST00000555414 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 CPVLQ9H3G5 476 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
APEX1-210ENST00000555414 C6orf50Q9HD87 102 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 BARHL2Q9NY43 387 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 PPP1R9AQ9ULJ8 1098 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 AGTPBP1Q9UPW5 1226 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 BRD1O95696 1058 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 NAPAP54920 295 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 INHBEP58166 350 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 QRICH1Q2TAL8 776 aa13.39□□□□□ -0.27
APEX1-210ENST00000555414 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms