RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 ZNF70Q9UC06 446 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-211ENST00000555082 ZNF646O15015 1829 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-211ENST00000555082 NRDCO43847 1150 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 ZNF202O95125 648 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 ZRANB2O95218 330 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRKCH-211ENST00000555082 PLEKHA8P1O95397 391 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 SERPINC1P01008 464 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 PDE4CQ08493 712 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 NCAPHQ15003 741 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRKCH-211ENST00000555082 ARGLU1Q9NWB6 273 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-211ENST00000555082 SERPINB13Q9UIV8 391 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 ROBO3Q96MS0 1386 aa11.29□□□□□ -0.6
PRKCH-211ENST00000555082 WNT10BO00744 389 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 OAS2P29728 719 aaKnown RBP11.28□□□□□ -0.6
PRKCH-211ENST00000555082 SHMT1P34896 483 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 NTRK3Q16288 839 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 RTN1Q16799 776 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 ADALQ6DHV7 355 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 TRIM65Q6PJ69 517 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 KRBA2Q6ZNG9 492 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 MICALL2Q8IY33 904 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 LLPHQ9BRT6 129 aaKnown RBP11.28□□□□□ -0.6
PRKCH-211ENST00000555082 TMEM39BQ9GZU3 492 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 VPS33BQ9H267 617 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 CPVLQ9H3G5 476 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 HDAC9Q9UKV0 1011 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 FZD9O00144 591 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 MPHOSPH10O00566 681 aaKnown RBP11.28□□□□□ -0.6
PRKCH-211ENST00000555082 TADA3O75528 432 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 UBASH3AP57075 661 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 RAD51AP2Q09MP3 1159 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 PDILTQ8N807 584 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 FANCBQ8NB91 859 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 AGBL3Q8NEM8 1001 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 IDI2Q9BXS1 227 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 SLC26A6Q9BXS9 759 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 MYOZ2Q9NPC6 264 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 FER1L6Q2WGJ9 1857 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
PRKCH-211ENST00000555082 MYO3BQ8WXR4 1341 aa11.27□□□□□ -0.6
PRKCH-211ENST00000555082 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.6
PRKCH-211ENST00000555082 SPTLC2O15270 562 aa11.27□□□□□ -0.6
PRKCH-211ENST00000555082 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.6
PRKCH-211ENST00000555082 NLRP12P59046 1061 aa11.27□□□□□ -0.6
PRKCH-211ENST00000555082 TPM4P67936 248 aa11.27□□□□□ -0.6
PRKCH-211ENST00000555082 TROAPQ12815 778 aa11.27□□□□□ -0.6
PRKCH-211ENST00000555082 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.6
PRKCH-211ENST00000555082 KCND1Q9NSA2 647 aa11.27□□□□□ -0.6
PRKCH-211ENST00000555082 GDF11O95390 407 aa11.27□□□□□ -0.61
PRKCH-211ENST00000555082 GOLGA8HP0CJ92 632 aa11.27□□□□□ -0.61
PRKCH-211ENST00000555082 JAG1P78504 1218 aa11.27□□□□□ -0.61
PRKCH-211ENST00000555082 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
PRKCH-211ENST00000555082 RRP1BQ14684 758 aaKnown RBP11.27□□□□□ -0.61
PRKCH-211ENST00000555082 MIGA2Q7L4E1 593 aa11.27□□□□□ -0.61
PRKCH-211ENST00000555082 C8orf76Q96K31 380 aa11.27□□□□□ -0.61
PRKCH-211ENST00000555082 WDR24Q96S15 920 aa11.27□□□□□ -0.61
PRKCH-211ENST00000555082 RTEL1Q9NZ71 1219 aa11.27□□□□□ -0.61
PRKCH-211ENST00000555082 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.61
PRKCH-211ENST00000555082 CNOT7Q9UIV1 285 aaKnown RBP11.27□□□□□ -0.61
PRKCH-211ENST00000555082 TULP2O00295 520 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 HLA-DOAP06340 250 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 GNG11P61952 73 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 TNIP1Q15025 636 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 CATIPQ7Z7H3 387 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 REXO1L1PQ8IX06 675 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 STAG2Q8N3U4 1231 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 TMEM47Q9BQJ4 181 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 KIF28PB7ZC32 967 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 VEGFAP15692 232 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-211ENST00000555082 PFKFB1P16118 471 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 PRAMEF18Q5VWM3 479 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 LRRC47Q8N1G4 583 aaKnown RBP11.26□□□□□ -0.61
PRKCH-211ENST00000555082 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
PRKCH-211ENST00000555082 FEZ2Q9UHY8 353 aaPredicted RBP11.26□□□□□ -0.61
PRKCH-211ENST00000555082 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
PRKCH-211ENST00000555082 DDX60LQ5H9U9 1706 aaKnown RBP11.26□□□□□ -0.61
PRKCH-211ENST00000555082 TBC1D8O95759 1140 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 PNOCQ13519 176 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 KARSQ15046 597 aaKnown RBP11.25□□□□□ -0.61
PRKCH-211ENST00000555082 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 TMTC2Q8N394 836 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 HSD3B7Q9H2F3 369 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 RNF181Q9P0P0 153 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 MYH1P12882 1939 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
PRKCH-211ENST00000555082 DDNO94850 711 aaPredicted RBP11.25□□□□□ -0.61
PRKCH-211ENST00000555082 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
PRKCH-211ENST00000555082 DLK2Q6UY11 383 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 ALG1Q9BT22 464 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 TMOD2Q9NZR1 351 aa11.25□□□□□ -0.61
PRKCH-211ENST00000555082 LCMT1Q9UIC8 334 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms