RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 LEO1Q8WVC0 666 aaPredicted RBP20.05■□□□□ 0.8
SHOX-204ENST00000554971 C12orf42Q96LP6 360 aa20.05■□□□□ 0.8
SHOX-204ENST00000554971 WDR19Q8NEZ3 1342 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 BTBD19C9JJ37 291 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 PRC1O43663 620 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 SCRN1Q12765 414 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 RESTQ13127 1097 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 VCPKMTQ9H867 229 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 BRCA2P51587 3418 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 CAVIN2O95810 425 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 TPM2P07951 284 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 VCAM1P19320 739 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 GADL1Q6ZQY3 521 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 DGKHQ86XP1 1220 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 PROCA1Q8NCQ7 364 aaPredicted RBP20.04■□□□□ 0.8
SHOX-204ENST00000554971 ANKS1AQ92625 1134 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 UBAC1Q9BSL1 405 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 NUP62CLQ9H1M0 184 aa20.04■□□□□ 0.8
SHOX-204ENST00000554971 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.04■□□□□ 0.8
SHOX-204ENST00000554971 BAZ2BQ9UIF8 2168 aaKnown RBP20.03■□□□□ 0.8
SHOX-204ENST00000554971 F5H6K3 240 aa20.03■□□□□ 0.8
SHOX-204ENST00000554971 TPM3P06753 285 aa20.03■□□□□ 0.8
SHOX-204ENST00000554971 USP14P54578 494 aa20.03■□□□□ 0.8
SHOX-204ENST00000554971 KLRC3Q07444 240 aa20.03■□□□□ 0.8
SHOX-204ENST00000554971 USP17L2Q6R6M4 530 aa20.03■□□□□ 0.8
SHOX-204ENST00000554971 RBM43Q6ZSC3 357 aaKnown RBP20.03■□□□□ 0.8
SHOX-204ENST00000554971 FERMT3Q86UX7 667 aa20.03■□□□□ 0.8
SHOX-204ENST00000554971 IFNL1Q8IU54 200 aa20.03■□□□□ 0.8
SHOX-204ENST00000554971 NSUN7Q8NE18 718 aaKnown RBP20.03■□□□□ 0.8
SHOX-204ENST00000554971 NDUFB10O96000 172 aa20.02■□□□□ 0.8
SHOX-204ENST00000554971 PTMAP06454 111 aaKnown RBP20.02■□□□□ 0.8
SHOX-204ENST00000554971 INHBEP58166 350 aa20.02■□□□□ 0.8
SHOX-204ENST00000554971 SREBF2Q12772 1141 aa20.02■□□□□ 0.8
SHOX-204ENST00000554971 LY9Q9HBG7 655 aa20.02■□□□□ 0.8
SHOX-204ENST00000554971 IFIT3O14879 490 aaKnown RBP20.02■□□□□ 0.79
SHOX-204ENST00000554971 JAK2O60674 1132 aa20.02■□□□□ 0.79
SHOX-204ENST00000554971 TOP1P11387 765 aaKnown RBP20.02■□□□□ 0.79
SHOX-204ENST00000554971 FASTKD5Q7L8L6 764 aaKnown RBP20.02■□□□□ 0.79
SHOX-204ENST00000554971 GMCL1P1Q8NEA9 526 aa20.02■□□□□ 0.79
SHOX-204ENST00000554971 NUP88Q99567 741 aaPredicted RBP20.02■□□□□ 0.79
SHOX-204ENST00000554971 SH2D4AQ9H788 454 aa20.02■□□□□ 0.79
SHOX-204ENST00000554971 SYNPO2Q9UMS6 1093 aa20.02■□□□□ 0.79
SHOX-204ENST00000554971 AGTPBP1Q9UPW5 1226 aa20.02■□□□□ 0.79
SHOX-204ENST00000554971 SH2B2O14492 632 aaPredicted RBP20.01■□□□□ 0.79
SHOX-204ENST00000554971 DHX16O60231 1041 aaKnown RBP20.01■□□□□ 0.79
SHOX-204ENST00000554971 TMEM67Q5HYA8 995 aa20■□□□□ 0.79
SHOX-204ENST00000554971 IFIT1BQ5T764 474 aaKnown RBP20■□□□□ 0.79
SHOX-204ENST00000554971 ANKRD23Q86SG2 305 aa20■□□□□ 0.79
SHOX-204ENST00000554971 LPAR1Q92633 364 aa20■□□□□ 0.79
SHOX-204ENST00000554971 GOPCQ9HD26 462 aa20■□□□□ 0.79
SHOX-204ENST00000554971 TMOD4Q9NZQ9 345 aa20■□□□□ 0.79
SHOX-204ENST00000554971 PDIA3P30101 505 aaKnown RBP20■□□□□ 0.79
SHOX-204ENST00000554971 PPP4R3BQ5MIZ7 849 aa20■□□□□ 0.79
SHOX-204ENST00000554971 JMYQ8N9B5 988 aa20■□□□□ 0.79
SHOX-204ENST00000554971 PNMA1Q8ND90 353 aa20■□□□□ 0.79
SHOX-204ENST00000554971 FAM200AQ8TCP9 573 aa20■□□□□ 0.79
SHOX-204ENST00000554971 ZNF396Q96N95 335 aaPredicted RBP20■□□□□ 0.79
SHOX-204ENST00000554971 MTA3Q9BTC8 594 aa20■□□□□ 0.79
SHOX-204ENST00000554971 CLSTN2Q9H4D0 955 aa20■□□□□ 0.79
SHOX-204ENST00000554971 RCOR1Q9UKL0 485 aa20■□□□□ 0.79
SHOX-204ENST00000554971 COL11A1P12107 1806 aaPredicted RBP19.99■□□□□ 0.79
SHOX-204ENST00000554971 PDHXO00330 501 aa19.99■□□□□ 0.79
SHOX-204ENST00000554971 RAD21O60216 631 aa19.99■□□□□ 0.79
SHOX-204ENST00000554971 ADCY5O95622 1261 aa19.99■□□□□ 0.79
SHOX-204ENST00000554971 HOXA7P31268 230 aaPredicted RBP19.99■□□□□ 0.79
SHOX-204ENST00000554971 WTAPQ15007 396 aa19.99■□□□□ 0.79
SHOX-204ENST00000554971 CCDC178Q5BJE1 867 aa19.99■□□□□ 0.79
SHOX-204ENST00000554971 TMEM87BQ96K49 555 aa19.99■□□□□ 0.79
SHOX-204ENST00000554971 TNMDQ9H2S6 317 aa19.99■□□□□ 0.79
SHOX-204ENST00000554971 RPAP3Q9H6T3 665 aaPredicted RBP19.99■□□□□ 0.79
SHOX-204ENST00000554971 USP25Q9UHP3 1055 aa19.99■□□□□ 0.79
SHOX-204ENST00000554971 PTPDC1A2A3K4 754 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 SNHG28P0DPA3 235 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 SART3Q15020 963 aaKnown RBP19.98■□□□□ 0.79
SHOX-204ENST00000554971 FAM83BQ5T0W9 1011 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 POTEEQ6S8J3 1075 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 REM2Q8IYK8 340 aaPredicted RBP19.98■□□□□ 0.79
SHOX-204ENST00000554971 R3HDMLQ9H3Y0 253 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 MTMR7Q9Y216 660 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 SMCHD1A6NHR9 2005 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 WDR46O15213 610 aaKnown RBP19.98■□□□□ 0.79
SHOX-204ENST00000554971 CTAGE5O15320 804 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 CYP2C8P10632 490 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 PDHBP11177 359 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 LIFRP42702 1097 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 APOBRQ0VD83 1088 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 SLFN13Q68D06 897 aa19.98■□□□□ 0.79
SHOX-204ENST00000554971 TFIP11Q9UBB9 837 aaKnown RBP19.98■□□□□ 0.79
SHOX-204ENST00000554971 ERICH2A1L162 156 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 CTDNEP1O95476 244 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 LIG1P18858 919 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 TROAPQ12815 778 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 CATSPERGQ6ZRH7 1159 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 SGMS1Q86VZ5 419 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 GMCL1Q96IK5 515 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 ASCC2Q9H1I8 757 aaPredicted RBP19.97■□□□□ 0.79
SHOX-204ENST00000554971 KAT14Q9H8E8 782 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 FBXO28Q9NVF7 368 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 WBP1LQ9NX94 342 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 RNF186Q9NXI6 227 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms