RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TFIP11Q9UBB9 837 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 ABCF2Q9UG63 623 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 EVLQ9UI08 416 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 ZHX1Q9UKY1 873 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 RABL2BQ9UNT1 228 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 LOC285556D6RIA3 1793 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 SYNRGQ9UMZ2 1314 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 DOCK2Q92608 1830 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 IFRD1O00458 451 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 MTA2O94776 668 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 IL1R1P14778 569 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 KCNA2P16389 499 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 NDUFV2P19404 249 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 HSD3B2P26439 372 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 CASQ1P31415 396 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 MAN1A1P33908 653 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 PRMT2P55345 433 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 CTSWP56202 376 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 WASHC5Q12768 1159 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 SEPT2Q15019 361 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 TMEM164Q5U3C3 297 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 FERMT3Q86UX7 667 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 SNRNP27Q8WVK2 155 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 ATRIPQ8WXE1 791 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 TAF4BQ92750 862 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 NELL1Q92832 810 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 HPS1Q92902 700 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 LARP6Q9BRS8 491 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 ZC3H12CQ9C0D7 883 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 ANKRD2Q9GZV1 360 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 OSBPL2Q9H1P3 480 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 RETREG1Q9H6L5 497 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 MRS2Q9HD23 443 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 TMEM63CQ9P1W3 806 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 AKAP2Q9Y2D5 859 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 FAM205AQ6ZU69 1335 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 KIF16BQ96L93 1317 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 PTPRFP10586 1907 aa3.19□□□□□ -1.9
PRPF39-206ENST00000554429 GOLGB1Q14789 3259 aaKnown RBP3.19□□□□□ -1.9
PRPF39-206ENST00000554429 FAM177BA6PVY3 158 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 TBX3O15119 743 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 PAX7P23759 505 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ADD2P35612 726 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 IFT88Q13099 833 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 MAPRE1Q15691 268 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 Q3C1V9 767 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 TBC1D10BQ4KMP7 808 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ANGEL2Q5VTE6 544 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ARMC9Q7Z3E5 817 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 METTL16Q86W50 562 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ANKRD18AQ8IVF6 992 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 UHMK1Q8TAS1 419 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF296Q8WUU4 475 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ERP27Q96DN0 273 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ERO1AQ96HE7 468 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 CEP89Q96ST8 783 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 THUMPD2Q9BTF0 503 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 CCDC94Q9BW85 323 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 KRTAP17-1Q9BYP8 105 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 YY1AP1Q9H869 796 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 KMT5AQ9NQR1 393 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 RNF19AQ9NV58 838 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 TMCC3Q9ULS5 477 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 TNRC18O15417 2968 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 hCG_1984214I3L0E3 225 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 UFL1O94874 794 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 NF2P35240 595 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 RFC5P40937 340 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 CLK1P49759 484 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 GNAI1P63096 354 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 KSR2Q6VAB6 950 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 TRIM46Q7Z4K8 759 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 TTLL11Q8NHH1 800 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 WNK4Q96J92 1243 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 UCN2Q96RP3 112 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 DUSP9Q99956 384 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 PRO3102Q9H379 93 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 SUDS3Q9H7L9 328 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 KANSL2Q9H9L4 492 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 DBNDD1Q9H9R9 158 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 KCNQ5Q9NR82 932 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 MINPP1Q9UNW1 487 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 PTPN22Q9Y2R2 807 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 CHMP3Q9Y3E7 222 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 FOCADQ5VW36 1801 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ADGRA2Q96PE1 1338 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 DOCK1Q14185 1865 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 ALPK3Q96L96 1907 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 A0A1W2PPC1 479 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 GRXCR2A6NFK2 248 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 WNT10BO00744 389 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 DDX58O95786 925 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 TRAPPC10P48553 1259 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 FKBP1CQ5VVH2 108 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 UBE2Q1Q7Z7E8 422 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 FLCNQ8NFG4 579 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 FAM89AQ96GI7 184 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 C8orf48Q96LL4 319 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 FAM126AQ9BYI3 521 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms