RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 FAM83BQ5T0W9 1011 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 VPS53Q5VIR6 699 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 WDR78Q5VTH9 848 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 ABRAQ8N0Z2 381 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 ANKLE1Q8NAG6 615 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 FAM227BQ96M60 508 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 CCDC171Q6TFL3 1326 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 ORC4O43929 436 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 FARP2O94887 1054 aaPredicted RBP12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 TFRCP02786 760 aaKnown RBP12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 FGRP09769 529 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 ERCC3P19447 782 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 TRIM32Q13049 653 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 TMEM132BQ14DG7 1078 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 RILPL2Q969X0 211 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 SLF1Q9BQI6 1058 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 HTATIP2Q9BUP3 242 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 FBXO28Q9NVF7 368 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 CLIP2Q9UDT6 1046 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 ALPK3Q96L96 1907 aa12.35□□□□□ -0.43
PTCD2P1-201ENST00000554393 HIP1O00291 1037 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 VWA5AO00534 786 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 IGHA2P01877 340 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 FGAP02671 866 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 HSPD1P10809 573 aaKnown RBP12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 PCP11498 1178 aaKnown RBP12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 SDSP20132 328 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 ADORA2AP29274 412 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 TFAP4Q01664 338 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 CACNB2Q08289 660 aaPredicted RBP12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 CCL14Q16627 93 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 MFSD14CQ5VZR4 134 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 ZNF589Q86UQ0 364 aaPredicted RBP12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 RIOX2Q8IUF8 465 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 REPS2Q8NFH8 660 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 ZNF214Q9UL59 606 aaPredicted RBP12.34□□□□□ -0.43
PTCD2P1-201ENST00000554393 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 STK25O00506 426 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 RAD21O60216 631 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 NOVP48745 357 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 NT5C2P49902 561 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 PLS1Q14651 629 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 OLFML2BQ68BL8 750 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 PRPF38AQ8NAV1 312 aaKnown RBP12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 OGDHLQ9ULD0 1010 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.44
PTCD2P1-201ENST00000554393 MSCO60682 206 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 FDX1P10109 184 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 FCER1AP12319 257 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 STAT3P40763 770 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 NECAB2Q7Z6G3 386 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 DPP9Q86TI2 863 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 LRRC47Q8N1G4 583 aaKnown RBP12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 NPLOC4Q8TAT6 608 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 NUP88Q99567 741 aaPredicted RBP12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 DIAPH3Q9NSV4 1193 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 FLRT1Q9NZU1 646 aa12.32□□□□□ -0.44
PTCD2P1-201ENST00000554393 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 BMP3P12645 472 aa12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 CCND3P30281 292 aaPredicted RBP12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 OAZ1P54368 228 aa12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 SLFN13Q68D06 897 aa12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 LHX8Q68G74 356 aa12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 IL17RBQ9NRM6 502 aa12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 STX8Q9UNK0 236 aa12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 DIS3Q9Y2L1 958 aaKnown RBP12.31□□□□□ -0.44
PTCD2P1-201ENST00000554393 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 PLA2G6O60733 806 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 COBLO75128 1261 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 ZBED4O75132 1171 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 PDE4AP27815 886 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 STAT2P52630 851 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 KCTD2Q14681 263 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 FAM160B2Q86V87 743 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 STAG1Q8WVM7 1258 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 PAWRQ96IZ0 340 aaKnown RBP12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 MMP19Q99542 508 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 DSCC1Q9BVC3 393 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 RNF41Q9H4P4 317 aaPredicted RBP12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 NR2E3Q9Y5X4 410 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 TACC3Q9Y6A5 838 aa12.3□□□□□ -0.44
PTCD2P1-201ENST00000554393 CYBAP13498 195 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 CYP2C19P33261 490 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms