RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 HMGB1P09429 215 aaKnown RBP10.94□□□□□ -0.66
CHD8-206ENST00000553870 XRCC5P13010 732 aaKnown RBP10.94□□□□□ -0.66
CHD8-206ENST00000553870 HSPA4P34932 840 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 PRKCZQ05513 592 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 ZNF543Q08ER8 600 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 TMEM132BQ14DG7 1078 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 TRMT44Q8IYL2 757 aaKnown RBP10.94□□□□□ -0.66
CHD8-206ENST00000553870 ABRAQ8N0Z2 381 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 REPS2Q8NFH8 660 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 IGDCC4Q8TDY8 1250 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 ARMC5Q96C12 935 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 NEK1Q96PY6 1258 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 MOV10L1Q9BXT6 1211 aaKnown RBP10.94□□□□□ -0.66
CHD8-206ENST00000553870 TEX13BQ9BXU2 312 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 PORCNQ9H237 461 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 SLC38A10Q9HBR0 1119 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 CWC22Q9HCG8 908 aaKnown RBP10.94□□□□□ -0.66
CHD8-206ENST00000553870 IVNS1ABPQ9Y6Y0 642 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 RLFQ13129 1914 aa10.94□□□□□ -0.66
CHD8-206ENST00000553870 WDR19Q8NEZ3 1342 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 ERCC3P19447 782 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 PTPREP23469 700 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 RGS2P41220 211 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 IKQ13123 557 aaPredicted RBP10.93□□□□□ -0.66
CHD8-206ENST00000553870 PLS1Q14651 629 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 WTAPQ15007 396 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 CCDC96Q2M329 555 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 TKFCQ3LXA3 575 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 ASPRV1Q53RT3 343 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 MORN1Q5T089 497 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 KCTD1Q719H9 257 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 SLAIN1Q8ND83 568 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 USP6NLQ92738 828 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 USP26Q9BXU7 913 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 SLC5A4Q9NY91 659 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 FBXO40Q9UH90 709 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 ZNF214Q9UL59 606 aaPredicted RBP10.93□□□□□ -0.66
CHD8-206ENST00000553870 PTCH2Q9Y6C5 1203 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 TAF6LQ9Y6J9 622 aa10.93□□□□□ -0.66
CHD8-206ENST00000553870 ADCY3O60266 1144 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 HOXC6P09630 235 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 PARP1P09874 1014 aaKnown RBP10.92□□□□□ -0.66
CHD8-206ENST00000553870 CAPN2P17655 700 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 PSMA5P28066 241 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 GRK4P32298 578 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 LIFRP42702 1097 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 GRB14Q14449 540 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 TMEM67Q5HYA8 995 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 SYDE2Q5VT97 1194 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 SAMD1Q6SPF0 538 aaPredicted RBP10.92□□□□□ -0.66
CHD8-206ENST00000553870 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.92□□□□□ -0.66
CHD8-206ENST00000553870 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
CHD8-206ENST00000553870 NCAPG2Q86XI2 1143 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 CHST13Q8NET6 341 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 PRR12Q9ULL5 1215 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 ISY1Q9ULR0 285 aaKnown RBP10.92□□□□□ -0.66
CHD8-206ENST00000553870 GABRQQ9UN88 632 aa10.92□□□□□ -0.66
CHD8-206ENST00000553870 PRC1O43663 620 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 PEX10O60683 326 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
CHD8-206ENST00000553870 FCER1AP12319 257 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 ANTXR2P58335 489 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 UBXN2AP68543 259 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 EXOSC10Q01780 885 aaKnown RBP10.91□□□□□ -0.66
CHD8-206ENST00000553870 TROAPQ12815 778 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 MAP2K5Q13163 448 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 WDR78Q5VTH9 848 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 SNRNP48Q6IEG0 339 aaKnown RBP10.91□□□□□ -0.66
CHD8-206ENST00000553870 TTBK2Q6IQ55 1244 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 CATIPQ7Z7H3 387 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 SGMS1Q86VZ5 419 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 CPXCR1Q8N123 301 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 MAF1Q9H063 256 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 RANBP17Q9H2T7 1088 aaKnown RBP10.91□□□□□ -0.66
CHD8-206ENST00000553870 GPCPD1Q9NPB8 672 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 MTMR7Q9Y216 660 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 DIS3Q9Y2L1 958 aaKnown RBP10.91□□□□□ -0.66
CHD8-206ENST00000553870 MGAMO43451 1857 aa10.91□□□□□ -0.66
CHD8-206ENST00000553870 PALM3A6NDB9 673 aaPredicted RBP10.9□□□□□ -0.66
CHD8-206ENST00000553870 SH2B2O14492 632 aaPredicted RBP10.9□□□□□ -0.66
CHD8-206ENST00000553870 DDAH1O94760 285 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 ICAM1P05362 532 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 CALM1P0DP23 149 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 CALM2P0DP24 149 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 CALM3P0DP25 149 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 SMARCA1P28370 1054 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 KCTD2Q14681 263 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 CHST3Q7LGC8 479 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 DPP9Q86TI2 863 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 FBXL16Q8N461 479 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 ZNF333Q96JL9 665 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 APBA2Q99767 749 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 LZTS2Q9BRK4 669 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 LY9Q9HBG7 655 aa10.9□□□□□ -0.66
CHD8-206ENST00000553870 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
CHD8-206ENST00000553870 SNX14Q9Y5W7 946 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms