RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 LDLRAD1Q5T700 205 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 KRT40Q6A162 431 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 OTUD7BQ6GQQ9 843 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 BTNL9Q6UXG8 535 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 ADGRF4Q8IZF3 695 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 PIGSQ96S52 555 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 JMJD4Q9H9V9 463 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 GPBP1L1Q9HC44 474 aaPredicted RBP13.58□□□□□ -0.24
NEK9-202ENST00000553823 GJB4Q9NTQ9 266 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 AFG3L2Q9Y4W6 797 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 UNCXA6NJT0 531 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 TRIM75PA6NK02 468 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 WDR46O15213 610 aaKnown RBP13.57□□□□□ -0.24
NEK9-202ENST00000553823 PLA2G6O60733 806 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 STAT2P52630 851 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 IKQ13123 557 aaPredicted RBP13.57□□□□□ -0.24
NEK9-202ENST00000553823 SYDE2Q5VT97 1194 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 MCTP1Q6DN14 999 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 ERO1BQ86YB8 467 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 HOMER1Q86YM7 354 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 RBM46Q8TBY0 533 aaKnown RBP13.57□□□□□ -0.24
NEK9-202ENST00000553823 CHURC1Q8WUH1 139 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 CLMNQ96JQ2 1002 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 GBA2Q9HCG7 927 aaPredicted RBP13.57□□□□□ -0.24
NEK9-202ENST00000553823 SH3GLB2Q9NR46 395 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 EMILIN3Q9NT22 766 aa13.57□□□□□ -0.24
NEK9-202ENST00000553823 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.57□□□□□ -0.24
NEK9-202ENST00000553823 PNMA6FA0A0J9YX94 578 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
NEK9-202ENST00000553823 ITGBL1O95965 494 aaPredicted RBP13.56□□□□□ -0.24
NEK9-202ENST00000553823 PPATQ06203 517 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
NEK9-202ENST00000553823 HEATR3Q7Z4Q2 680 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 FERMT3Q86UX7 667 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 FAM160B2Q86V87 743 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 FAM177A1Q8N128 213 aaPredicted RBP13.56□□□□□ -0.24
NEK9-202ENST00000553823 GPKOWQ92917 476 aaPredicted RBP eCLIP13.56□□□□□ -0.24
NEK9-202ENST00000553823 C12orf42Q96LP6 360 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 ZSCAN16Q9H4T2 348 aaPredicted RBP13.56□□□□□ -0.24
NEK9-202ENST00000553823 VPS54Q9P1Q0 977 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 FEM1BQ9UK73 627 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 KCNJ14Q9UNX9 436 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 ATP6V1DQ9Y5K8 247 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 MYH15Q9Y2K3 1946 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 SMCHD1A6NHR9 2005 aa13.56□□□□□ -0.24
NEK9-202ENST00000553823 hCG_1984214I3L0E3 225 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 ZBTB5O15062 677 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 MMP1P03956 469 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 VCAM1P19320 739 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 HMGCS2P54868 508 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 RESTQ13127 1097 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 SH3D19Q5HYK7 790 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 CLEC17AQ6ZS10 378 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 ZNF713Q8N859 430 aaPredicted RBP13.55□□□□□ -0.24
NEK9-202ENST00000553823 C2orf69Q8N8R5 385 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 CCDC148Q8NFR7 591 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 GBP4Q96PP9 640 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 BARHL2Q9NY43 387 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 PRR12Q9ULL5 1215 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 PARP14Q460N5 1801 aa13.55□□□□□ -0.24
NEK9-202ENST00000553823 STXBP3O00186 592 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 CXCL11O14625 94 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 CALML3P27482 149 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 NLRP5P59047 1200 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 KIF23Q02241 960 aaPredicted RBP13.54□□□□□ -0.24
NEK9-202ENST00000553823 PPIL2Q13356 520 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 DGKZQ13574 1117 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 CDC37Q16543 378 aaPredicted RBP13.54□□□□□ -0.24
NEK9-202ENST00000553823 QRICH1Q2TAL8 776 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 CCDC12Q8WUD4 166 aaPredicted RBP13.54□□□□□ -0.24
NEK9-202ENST00000553823 SHISA4Q96DD7 197 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 PHF20Q9BVI0 1012 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
NEK9-202ENST00000553823 RPAP3Q9H6T3 665 aaPredicted RBP13.54□□□□□ -0.24
NEK9-202ENST00000553823 IRF6O14896 467 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
NEK9-202ENST00000553823 NAPAP54920 295 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 GNL2Q13823 731 aaKnown RBP13.53□□□□□ -0.24
NEK9-202ENST00000553823 FOXD4L6Q3SYB3 417 aaPredicted RBP13.53□□□□□ -0.24
NEK9-202ENST00000553823 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 FOXD4L3Q6VB84 417 aaPredicted RBP13.53□□□□□ -0.24
NEK9-202ENST00000553823 BRAPQ7Z569 592 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
NEK9-202ENST00000553823 KIFC2Q96AC6 838 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 OPTNQ96CV9 577 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 SLF1Q9BQI6 1058 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 FOXP1Q9H334 677 aaPredicted RBP13.53□□□□□ -0.24
NEK9-202ENST00000553823 BRMS1Q9HCU9 246 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 KCNH4Q9UQ05 1017 aa13.53□□□□□ -0.24
NEK9-202ENST00000553823 RLFQ13129 1914 aa13.52□□□□□ -0.24
NEK9-202ENST00000553823 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms