RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FBXL21Q9UKT6 434 aa6.82□□□□□ -1.32
SCFD1-210ENST00000553693 KIR2DL1P43626 348 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-210ENST00000553693 KIR2DL2P43627 348 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-210ENST00000553693 AUHQ13825 339 aaKnown RBP6.81□□□□□ -1.32
SCFD1-210ENST00000553693 BBS9Q3SYG4 887 aa6.81□□□□□ -1.32
SCFD1-210ENST00000553693 TIGD5Q53EQ6 642 aa6.81□□□□□ -1.32
SCFD1-210ENST00000553693 GFOD1Q9NXC2 390 aa6.81□□□□□ -1.32
SCFD1-210ENST00000553693 YBX2Q9Y2T7 364 aaKnown RBP6.81□□□□□ -1.32
SCFD1-210ENST00000553693 TMEM82A0PJX8 343 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 FKTNO75072 461 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 TMEM253P0C7T8 217 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 ACRP10323 421 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 PMS1P54277 932 aaKnown RBP6.8□□□□□ -1.32
SCFD1-210ENST00000553693 RACK1P63244 317 aaKnown RBP6.8□□□□□ -1.32
SCFD1-210ENST00000553693 SLC14A2Q15849 920 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 ANKLE2Q86XL3 938 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 CCDC144CPQ8IYA2 1237 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 C7orf61Q8IZ16 206 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 RBBP8NLQ8NC74 664 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-210ENST00000553693 INTS4Q96HW7 963 aaKnown RBP6.8□□□□□ -1.32
SCFD1-210ENST00000553693 FCRL2Q96LA5 508 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-210ENST00000553693 EBF1Q9UH73 591 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 PPT2Q9UMR5 302 aa6.8□□□□□ -1.32
SCFD1-210ENST00000553693 FAM86C2PA6NEL3 165 aa6.79□□□□□ -1.32
SCFD1-210ENST00000553693 USP2O75604 605 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-210ENST00000553693 GUCY2CP25092 1073 aa6.79□□□□□ -1.32
SCFD1-210ENST00000553693 BMP8BP34820 402 aa6.79□□□□□ -1.32
SCFD1-210ENST00000553693 PAK2Q13177 524 aa6.79□□□□□ -1.32
SCFD1-210ENST00000553693 DSCC1Q9BVC3 393 aa6.79□□□□□ -1.32
SCFD1-210ENST00000553693 NRDCO43847 1150 aa6.78□□□□□ -1.32
SCFD1-210ENST00000553693 GSNP06396 782 aa6.78□□□□□ -1.32
SCFD1-210ENST00000553693 PDE6BP35913 854 aa6.78□□□□□ -1.32
SCFD1-210ENST00000553693 CEP128Q6ZU80 1094 aa6.78□□□□□ -1.32
SCFD1-210ENST00000553693 METTL16Q86W50 562 aaKnown RBP6.78□□□□□ -1.32
SCFD1-210ENST00000553693 LSRQ86X29 649 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-210ENST00000553693 GPRASP2Q96D09 838 aa6.78□□□□□ -1.32
SCFD1-210ENST00000553693 MRRFQ96E11 262 aaKnown RBP6.78□□□□□ -1.32
SCFD1-210ENST00000553693 HHIPL1Q96JK4 782 aa6.78□□□□□ -1.32
SCFD1-210ENST00000553693 CRBNQ96SW2 442 aa6.78□□□□□ -1.32
SCFD1-210ENST00000553693 TNFRSF10DQ9UBN6 386 aa6.78□□□□□ -1.32
SCFD1-210ENST00000553693 TCAF2A6NFQ2 919 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 MEIS1O00470 390 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 PSPNO60542 156 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 ZNF205O95201 554 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 GLDCP23378 1020 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 CWF19L1Q69YN2 538 aaKnown RBP6.77□□□□□ -1.33
SCFD1-210ENST00000553693 NLRX1Q86UT6 975 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 CDADC1Q9BWV3 514 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 CRTAC1Q9NQ79 661 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 SLC12A7Q9Y666 1083 aa6.77□□□□□ -1.33
SCFD1-210ENST00000553693 C9IYK1 514 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 PEX10O60683 326 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 SEMA7AO75326 666 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 KRT1P04264 644 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 INHBBP09529 407 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 C1QTNF9P0C862 333 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 MED14OSP0DP75 135 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 SOX9P48436 509 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 TDRD10Q5VZ19 366 aaKnown RBP6.76□□□□□ -1.33
SCFD1-210ENST00000553693 UNC5AQ6ZN44 842 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 ZNF605Q86T29 641 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 NT5DC4Q86YG4 428 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 OR6P1Q8NGX9 317 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 RASGRP4Q8TDF6 673 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 SHISA4Q96DD7 197 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 MINPP1Q9UNW1 487 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 EFR3BQ9Y2G0 817 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 TAF6LQ9Y6J9 622 aa6.76□□□□□ -1.33
SCFD1-210ENST00000553693 OR14I1A6ND48 311 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 NOTOA8MTQ0 251 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 VAV1P15498 845 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 CTSKP43235 329 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 EIF6P56537 245 aaKnown RBP6.75□□□□□ -1.33
SCFD1-210ENST00000553693 RTP1P59025 263 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 HDLBPQ00341 1268 aaKnown RBP6.75□□□□□ -1.33
SCFD1-210ENST00000553693 TRIM26Q12899 539 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-210ENST00000553693 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 NOL9Q5SY16 702 aaKnown RBP6.75□□□□□ -1.33
SCFD1-210ENST00000553693 GALNT18Q6P9A2 607 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 CRTC3Q6UUV7 619 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 CCDC81Q6ZN84 652 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 PPFIBP1Q86W92 1011 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 AMIGO3Q86WK7 504 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 CD320Q9NPF0 282 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 ERVK13-1Q9NX77 482 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-210ENST00000553693 GPR55Q9Y2T6 319 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-210ENST00000553693 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
SCFD1-210ENST00000553693 WTIPA6NIX2 430 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-210ENST00000553693 HRKO00198 91 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-210ENST00000553693 SHOXO15266 292 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 ITGA4P13612 1032 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 CTSWP56202 376 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 ZYXQ15942 572 aaKnown RBP6.74□□□□□ -1.33
SCFD1-210ENST00000553693 ADGRF1Q5T601 910 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 OLFML2BQ68BL8 750 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 ATG14Q6ZNE5 492 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 RUFY4Q6ZNE9 571 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms