RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PRKAG3Q9UGI9 489 aa5.39□□□□□ -1.55
VRK1-202ENST00000553683 SF3B6Q9Y3B4 125 aaKnown RBP5.39□□□□□ -1.55
VRK1-202ENST00000553683 TMEM82A0PJX8 343 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 SYPP08247 313 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 ZNF445P59923 1031 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 TMEM67Q5HYA8 995 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 NOL9Q5SY16 702 aaKnown RBP5.38□□□□□ -1.55
VRK1-202ENST00000553683 CWF19L1Q69YN2 538 aaKnown RBP5.38□□□□□ -1.55
VRK1-202ENST00000553683 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 BHLHE22Q8NFJ8 381 aaPredicted RBP5.38□□□□□ -1.55
VRK1-202ENST00000553683 ABHD4Q8TB40 342 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 FCRL2Q96LA5 508 aaPredicted RBP5.38□□□□□ -1.55
VRK1-202ENST00000553683 C8orf37Q96NL8 207 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 HAUS7Q99871 368 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.38□□□□□ -1.55
VRK1-202ENST00000553683 G6PC3Q9BUM1 346 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 DSCC1Q9BVC3 393 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 KLHL25Q9H0H3 589 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 SP110Q9HB58 689 aa5.38□□□□□ -1.55
VRK1-202ENST00000553683 CWC22Q9HCG8 908 aaKnown RBP5.38□□□□□ -1.55
VRK1-202ENST00000553683 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.38□□□□□ -1.55
VRK1-202ENST00000553683 CBFA2T2O43439 604 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 PPM1BO75688 479 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 VAV1P15498 845 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 CTSKP43235 329 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 PPP2R5EQ16537 467 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 DCAF15Q66K64 600 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 HEATR6Q6AI08 1181 aaKnown RBP5.37□□□□□ -1.55
VRK1-202ENST00000553683 ANAPC16Q96DE5 110 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 MAP6Q96JE9 813 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 FOXP3Q9BZS1 431 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 ZNF451Q9Y4E5 1061 aa5.37□□□□□ -1.55
VRK1-202ENST00000553683 ANKRD34BA5PLL1 514 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 NRDCO43847 1150 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 TP53P04637 393 aaPredicted RBP5.36□□□□□ -1.55
VRK1-202ENST00000553683 RPL10P27635 214 aaKnown RBP5.36□□□□□ -1.55
VRK1-202ENST00000553683 HK2P52789 917 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 POU4F1Q01851 419 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 GRB10Q13322 594 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 FYB2Q5VWT5 728 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 TDRD10Q5VZ19 366 aaKnown RBP5.36□□□□□ -1.55
VRK1-202ENST00000553683 VHLLQ6RSH7 139 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 WAPLQ7Z5K2 1190 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 MCF2L2Q86YR7 1114 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 ARHGEF39Q8N4T4 335 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 KLHL6Q8WZ60 621 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 CRTAC1Q9NQ79 661 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 ACTR10Q9NZ32 417 aa5.36□□□□□ -1.55
VRK1-202ENST00000553683 A0A1W2PQ45 241 aaPredicted RBP5.35□□□□□ -1.55
VRK1-202ENST00000553683 A0A1W2PQY0 241 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 ZNF503-AS2A6NEH8 195 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 FAM86C2PA6NEL3 165 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 RBAK-RBAKDNI3L0D1 243 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 CYP2R1Q6VVX0 501 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 IRF2BP1Q8IU81 584 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 CRACR2BQ8N4Y2 399 aaPredicted RBP5.35□□□□□ -1.55
VRK1-202ENST00000553683 FIBCD1Q8N539 461 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 SLC12A9Q9BXP2 914 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 SLC6A17Q9H1V8 727 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 ZMYM5Q9UJ78 669 aa5.35□□□□□ -1.55
VRK1-202ENST00000553683 WTIPA6NIX2 430 aaPredicted RBP5.34□□□□□ -1.55
VRK1-202ENST00000553683 FADS2P1A8MWK0 482 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.34□□□□□ -1.55
VRK1-202ENST00000553683 SMAD7O15105 426 aaKnown RBP5.34□□□□□ -1.55
VRK1-202ENST00000553683 FARP2O94887 1054 aaPredicted RBP5.34□□□□□ -1.55
VRK1-202ENST00000553683 FXNQ16595 210 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 RTP2Q5QGT7 225 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 KIAA1211LQ6NV74 962 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 POMZP3Q6PJE2 187 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 ARMC5Q96C12 935 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 HHIPL1Q96JK4 782 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 APBA2Q99767 749 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 EPN3Q9H201 632 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 SUSD2Q9UGT4 822 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 EBF1Q9UH73 591 aa5.34□□□□□ -1.55
VRK1-202ENST00000553683 YBX2Q9Y2T7 364 aaKnown RBP5.34□□□□□ -1.55
VRK1-202ENST00000553683 HRKO00198 91 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 EPHX1P07099 455 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 DNAJA1P31689 397 aaKnown RBP5.33□□□□□ -1.56
VRK1-202ENST00000553683 ERVFC1P60507 584 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 SLC14A2Q15849 920 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 HLA-DQA1Q5Y7H0 255 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 EEF1DP3Q658K8 133 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 RCSD1Q6JBY9 416 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 OGFOD2Q6N063 350 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 GALNT18Q6P9A2 607 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 CRTC3Q6UUV7 619 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 NLRX1Q86UT6 975 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 ZNF513Q8N8E2 541 aaPredicted RBP5.33□□□□□ -1.56
VRK1-202ENST00000553683 BRF1Q92994 677 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 FAM84AQ96KN4 292 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 ZNF408Q9H9D4 720 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 ERVK13-1Q9NX77 482 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 PCDHB10Q9UN67 800 aa5.33□□□□□ -1.56
VRK1-202ENST00000553683 TRBV23OR9-2A0A075B6M9 112 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 LRRC10BA6NIK2 292 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 NOTOA8MTQ0 251 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 H0Y8X5 98 aa5.32□□□□□ -1.56
VRK1-202ENST00000553683 FGF10O15520 208 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms