RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 ELOA3Q8NG57 546 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 MYD88Q99836 296 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 NIFKQ9BYG3 293 aaKnown RBP7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 DBF4Q9UBU7 674 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 STARD13Q9Y3M8 1113 aa7.16□□□□□ -1.26
SMARCE1P3-201ENST00000553649 BTBD19C9JJ37 291 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ELL2O00472 640 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ELNP15502 786 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 IREB2P48200 963 aaKnown RBP7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 GTF2A2P52657 109 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 GDF10P55107 478 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 NBPF12Q5TAG4 269 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ANKRD18AQ8IVF6 992 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ZBTB38Q8NAP3 1195 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 HYPKQ9NX55 129 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 CPA4Q9UI42 421 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PRR12Q9ULL5 1215 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 GABRQQ9UN88 632 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 IQSEC3Q9UPP2 1182 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 DOLKQ9UPQ8 538 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 ZNF804BA4D1E1 1349 aa7.15□□□□□ -1.26
SMARCE1P3-201ENST00000553649 PFASO15067 1338 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ADCY3O60266 1144 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 HSP90B1P14625 803 aaKnown RBP7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 XDHP47989 1333 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 SMTNP53814 917 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 MRPS5P82675 430 aaKnown RBP7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 GRIK4Q16099 956 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 STRIP1Q5VSL9 837 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 SYT9Q86SS6 491 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 OGFOD1Q8N543 542 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 C11orf49Q9H6J7 331 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 PHAXQ9H814 394 aaKnown RBP7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 MARK1Q9P0L2 795 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 THEGQ9P2T0 379 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 MED23Q9ULK4 1368 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 NDUFB9Q9Y6M9 179 aa7.14□□□□□ -1.27
SMARCE1P3-201ENST00000553649 PDE8AO60658 829 aa7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 HOXB7P09629 217 aa7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ATP2B4P23634 1241 aa7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 SMAD3P84022 425 aaKnown RBP7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 TRIM28Q13263 835 aaKnown RBP7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 WDR43Q15061 677 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 OXLD1Q5BKU9 147 aa7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 PRRT3Q5FWE3 981 aa7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 C9orf50Q5SZB4 431 aa7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 CWC25Q9NXE8 425 aaPredicted RBP7.13□□□□□ -1.27
SMARCE1P3-201ENST00000553649 M0R082 166 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 HYAL3O43820 417 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 WDHD1O75717 1129 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 PCCAP05165 728 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 COL6A1P12109 1028 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 FLT3LGP49771 235 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 NHLH1Q02575 133 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 RALBP1Q15311 655 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 SHHQ15465 462 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 SUPT20HL1Q3ZLR7 823 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 SAMD5Q5TGI4 173 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 KIAA0825Q8IV33 1275 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 CCDC191Q8NCU4 936 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ZNF417Q8TAU3 575 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 RUNDC1Q96C34 613 aa7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ZNF587Q96SQ5 575 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 CDC5LQ99459 802 aaKnown RBP7.12□□□□□ -1.27
SMARCE1P3-201ENST00000553649 AOX1Q06278 1338 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 FAM86C2PA6NEL3 165 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ADARB2-AS1A8MUL3 147 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 TMEM229AB2RXF0 380 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 DDX58O95786 925 aaKnown RBP7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ALBP02768 609 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 CENPBP07199 599 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 CETPP11597 493 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 NID1P14543 1247 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 KLRK1P26718 216 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 KCNJ4P48050 445 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 CTSWP56202 376 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 VGLL4Q14135 290 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 MCM6Q14566 821 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 LRRC26Q2I0M4 334 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 PPM1EQ8WY54 764 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 GREM2Q9H772 168 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ZDHHC3Q9NYG2 299 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 SERTAD1Q9UHV2 236 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 MINPP1Q9UNW1 487 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 MAP3K2Q9Y2U5 619 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 PCDHAC2Q9Y5I4 1007 aa7.11□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ZFHX4Q86UP3 3567 aa7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 NCOR1O75376 2440 aa7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 OTOFQ9HC10 1997 aa7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 SPDYE3A6NKU9 549 aa7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 F8W031 263 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 ALAS2P22557 587 aa7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 IGHMBP2P38935 993 aaKnown RBP7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 CCT4P50991 539 aaKnown RBP7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 FCGRTP55899 365 aa7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 GTF2IP78347 998 aa7.1□□□□□ -1.27
SMARCE1P3-201ENST00000553649 IRF5Q13568 498 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms