RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 STAT3P40763 770 aa16.81■□□□□ 0.28
PRPF39-204ENST00000553605 MRE11P49959 708 aa16.81■□□□□ 0.28
PRPF39-204ENST00000553605 GABPAQ06546 454 aa16.81■□□□□ 0.28
PRPF39-204ENST00000553605 GNASQ5JWF2 1037 aa16.81■□□□□ 0.28
PRPF39-204ENST00000553605 HLA-CQ95604 372 aa16.81■□□□□ 0.28
PRPF39-204ENST00000553605 ZNF512BQ96KM6 892 aaPredicted RBP16.81■□□□□ 0.28
PRPF39-204ENST00000553605 DBNDD2Q9BQY9 259 aa16.81■□□□□ 0.28
PRPF39-204ENST00000553605 API5Q9BZZ5 524 aaKnown RBP16.81■□□□□ 0.28
PRPF39-204ENST00000553605 HIPK3Q9H422 1215 aa16.81■□□□□ 0.28
PRPF39-204ENST00000553605 TRANK1O15050 2925 aa16.8■□□□□ 0.28
PRPF39-204ENST00000553605 MYO5AQ9Y4I1 1855 aaKnown RBP16.8■□□□□ 0.28
PRPF39-204ENST00000553605 TMEM179Q6ZVK1 233 aa16.8■□□□□ 0.28
PRPF39-204ENST00000553605 MAGEB6Q8N7X4 407 aa16.8■□□□□ 0.28
PRPF39-204ENST00000553605 VCPKMTQ9H867 229 aa16.8■□□□□ 0.28
PRPF39-204ENST00000553605 TMX2Q9Y320 296 aa16.8■□□□□ 0.28
PRPF39-204ENST00000553605 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
PRPF39-204ENST00000553605 LRRC37A2A6NM11 1700 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 UMODL1Q5DID0 1318 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 E9PSI1 815 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 WDR46O15213 610 aaKnown RBP16.79■□□□□ 0.28
PRPF39-204ENST00000553605 COPB2P35606 906 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 CCL23P55773 120 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 GJA9P57773 515 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 TNNI3KQ59H18 835 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 MAMDC4Q6UXC1 1216 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 SIAH1Q8IUQ4 282 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 RPUSD2Q8IZ73 545 aaKnown RBP16.79■□□□□ 0.28
PRPF39-204ENST00000553605 UPF3AQ9H1J1 476 aaKnown RBP16.79■□□□□ 0.28
PRPF39-204ENST00000553605 SH2D4AQ9H788 454 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 CERS4Q9HA82 394 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 ARHGEF10LQ9HCE6 1279 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 GPR108Q9NPR9 543 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 FPGT-TNNI3KV9GXZ4 949 aa16.79■□□□□ 0.28
PRPF39-204ENST00000553605 ZBBXA8MT70 800 aa16.78■□□□□ 0.28
PRPF39-204ENST00000553605 PRR33A8MZF0 331 aa16.78■□□□□ 0.28
PRPF39-204ENST00000553605 VWA5AO00534 786 aa16.78■□□□□ 0.28
PRPF39-204ENST00000553605 ATP2A2P16615 1042 aaKnown RBP16.78■□□□□ 0.28
PRPF39-204ENST00000553605 ACVR2BQ13705 512 aa16.78■□□□□ 0.28
PRPF39-204ENST00000553605 TMEM67Q5HYA8 995 aa16.78■□□□□ 0.28
PRPF39-204ENST00000553605 KRT40Q6A162 431 aa16.78■□□□□ 0.28
PRPF39-204ENST00000553605 CD320Q9NPF0 282 aa16.78■□□□□ 0.28
PRPF39-204ENST00000553605 FBXO28Q9NVF7 368 aa16.78■□□□□ 0.28
PRPF39-204ENST00000553605 PNMA6EA0A0J9YXQ4 647 aa16.77■□□□□ 0.28
PRPF39-204ENST00000553605 ADCY6O43306 1168 aa16.77■□□□□ 0.28
PRPF39-204ENST00000553605 CA3P07451 260 aa16.77■□□□□ 0.28
PRPF39-204ENST00000553605 EVX2Q03828 476 aa16.77■□□□□ 0.28
PRPF39-204ENST00000553605 CCDC144BQ3MJ40 725 aa16.77■□□□□ 0.28
PRPF39-204ENST00000553605 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
PRPF39-204ENST00000553605 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
PRPF39-204ENST00000553605 DDX11Q96FC9 970 aa16.77■□□□□ 0.28
PRPF39-204ENST00000553605 ZNF214Q9UL59 606 aaPredicted RBP16.77■□□□□ 0.28
PRPF39-204ENST00000553605 COL11A1P12107 1806 aaPredicted RBP16.76■□□□□ 0.27
PRPF39-204ENST00000553605 ICA1Q05084 483 aa16.76■□□□□ 0.27
PRPF39-204ENST00000553605 CLEC10AQ8IUN9 316 aa16.76■□□□□ 0.27
PRPF39-204ENST00000553605 ABHD16BQ9H3Z7 469 aa16.76■□□□□ 0.27
PRPF39-204ENST00000553605 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
PRPF39-204ENST00000553605 DNAJC25-GNG10A0A024R161 153 aa16.75■□□□□ 0.27
PRPF39-204ENST00000553605 EPOPA6NHQ4 379 aa16.75■□□□□ 0.27
PRPF39-204ENST00000553605 CTAGE5O15320 804 aa16.75■□□□□ 0.27
PRPF39-204ENST00000553605 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
PRPF39-204ENST00000553605 REPS2Q8NFH8 660 aa16.75■□□□□ 0.27
PRPF39-204ENST00000553605 RIOK1Q9BRS2 568 aaKnown RBP16.75■□□□□ 0.27
PRPF39-204ENST00000553605 NOC4LQ9BVI4 516 aaKnown RBP16.75■□□□□ 0.27
PRPF39-204ENST00000553605 WNT8AQ9H1J5 351 aa16.75■□□□□ 0.27
PRPF39-204ENST00000553605 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.75■□□□□ 0.27
PRPF39-204ENST00000553605 PPP1R9AQ9ULJ8 1098 aa16.75■□□□□ 0.27
PRPF39-204ENST00000553605 PARP14Q460N5 1801 aa16.75■□□□□ 0.27
PRPF39-204ENST00000553605 GNAI2P04899 355 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 NKX3-2P78367 333 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 BEX3Q00994 111 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 ITGA7Q13683 1181 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 TMED8Q6PL24 325 aaPredicted RBP16.74■□□□□ 0.27
PRPF39-204ENST00000553605 CXCL17Q6UXB2 119 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 ARNTL2Q8WYA1 636 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 VWCEQ96DN2 955 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 UIMC1Q96RL1 719 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 TRPV6Q9H1D0 765 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 SWAP70Q9UH65 585 aa16.74■□□□□ 0.27
PRPF39-204ENST00000553605 MAGEB6P1A0A0J9YX57 407 aa16.73■□□□□ 0.27
PRPF39-204ENST00000553605 CABYRO75952 493 aa16.73■□□□□ 0.27
PRPF39-204ENST00000553605 AKR1B1P15121 316 aa16.73■□□□□ 0.27
PRPF39-204ENST00000553605 NHLH1Q02575 133 aa16.73■□□□□ 0.27
PRPF39-204ENST00000553605 TTLL4Q14679 1199 aa16.73■□□□□ 0.27
PRPF39-204ENST00000553605 SCLYQ96I15 445 aa16.73■□□□□ 0.27
PRPF39-204ENST00000553605 B4GALT4O60513 344 aa16.72■□□□□ 0.27
PRPF39-204ENST00000553605 TAP1Q03518 808 aa16.72■□□□□ 0.27
PRPF39-204ENST00000553605 OS9Q13438 667 aaPredicted RBP16.72■□□□□ 0.27
PRPF39-204ENST00000553605 SNRNP48Q6IEG0 339 aaKnown RBP16.72■□□□□ 0.27
PRPF39-204ENST00000553605 DYNLL2Q96FJ2 89 aa16.72■□□□□ 0.27
PRPF39-204ENST00000553605 AGBL1Q96MI9 1066 aa16.72■□□□□ 0.27
PRPF39-204ENST00000553605 TEX13BQ9BXU2 312 aa16.72■□□□□ 0.27
PRPF39-204ENST00000553605 SEZ6LQ9BYH1 1024 aa16.72■□□□□ 0.27
PRPF39-204ENST00000553605 CRNKL1Q9BZJ0 848 aaKnown RBP16.72■□□□□ 0.27
PRPF39-204ENST00000553605 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
PRPF39-204ENST00000553605 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
PRPF39-204ENST00000553605 RIPK3Q9Y572 518 aa16.72■□□□□ 0.27
PRPF39-204ENST00000553605 GRIN2DO15399 1336 aa16.71■□□□□ 0.27
PRPF39-204ENST00000553605 PFKMP08237 780 aa16.71■□□□□ 0.27
PRPF39-204ENST00000553605 CYP2D6P10635 497 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms