RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 NEK1Q96PY6 1258 aa8.44□□□□□ -1.06
RDH11-203ENST00000553384 LBHD1Q9BQE6 289 aaPredicted RBP8.44□□□□□ -1.06
RDH11-203ENST00000553384 DNAJC18Q9H819 358 aa8.44□□□□□ -1.06
RDH11-203ENST00000553384 HELLSQ9NRZ9 838 aa8.44□□□□□ -1.06
RDH11-203ENST00000553384 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.44□□□□□ -1.06
RDH11-203ENST00000553384 MTMR6Q9Y217 621 aa8.44□□□□□ -1.06
RDH11-203ENST00000553384 TTC28Q96AY4 2481 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 USP17L5A8MUK1 530 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 MINDY4BA8MYZ0 360 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
RDH11-203ENST00000553384 GH2P01242 217 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 CYP2B6P20813 491 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 CLCN1P35523 988 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 TOB2Q14106 344 aaPredicted RBP8.43□□□□□ -1.06
RDH11-203ENST00000553384 CSPP1Q1MSJ5 1256 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 ABCB5Q2M3G0 1257 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 ZMYM1Q5SVZ6 1142 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 LARP1BQ659C4 914 aaKnown RBP8.43□□□□□ -1.06
RDH11-203ENST00000553384 LHX8Q68G74 356 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 GIMAP6Q6P9H5 292 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 CCDC84Q86UT8 332 aaPredicted RBP8.43□□□□□ -1.06
RDH11-203ENST00000553384 METTL16Q86W50 562 aaKnown RBP8.43□□□□□ -1.06
RDH11-203ENST00000553384 GPRC5AQ8NFJ5 357 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 TCEANC2Q96MN5 208 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 WDR18Q9BV38 432 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 NAPBQ9H115 298 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 PRDM6Q9NQX0 595 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 SWAP70Q9UH65 585 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 DOCK1Q14185 1865 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 PHIPQ8WWQ0 1821 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 DDX60LQ5H9U9 1706 aaKnown RBP8.43□□□□□ -1.06
RDH11-203ENST00000553384 VCANP13611 3396 aa8.43□□□□□ -1.06
RDH11-203ENST00000553384 CYP2D7A0A087X1C5 515 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 VPS37CA5D8V6 355 aaPredicted RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 GSG1L2A8MUP6 293 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 ESPNB1AK53 854 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 C19orf81C9J6K1 198 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 CYP21A2P08686 494 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 CYP2D6P10635 497 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 PDCP20941 246 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 HMGCS2P54868 508 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 UBE2HP62256 183 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 IRX3P78415 501 aaPredicted RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 LRRC26Q2I0M4 334 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 C12orf60Q5U649 245 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 TATDN1Q6P1N9 297 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 CTR9Q6PD62 1173 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 STK11IPQ8N1F8 1099 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 SP7Q8TDD2 431 aaPredicted RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 USP6NLQ92738 828 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 FEZ1Q99689 392 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 MKNK2Q9HBH9 465 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 ZNF287Q9HBT7 754 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 GINM1Q9NU53 330 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 ZBTB21Q9ULJ3 1066 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 BAZ2AQ9UIF9 1905 aaKnown RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 LAMA2P24043 3122 aaKnown RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 MSCO60682 206 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 DTNBO60941 627 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 SLC3A2P08195 630 aaKnown RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 RGS2P41220 211 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 BACE1P56817 501 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 MDM2Q00987 491 aaPredicted RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 CACNB2Q08289 660 aaPredicted RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 RRP1BQ14684 758 aaKnown RBP8.42□□□□□ -1.06
RDH11-203ENST00000553384 IFNL3Q8IZI9 196 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 SLC44A5Q8NCS7 719 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 DYNLL2Q96FJ2 89 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 TSPY26PQ9H489 355 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 TMOD4Q9NZQ9 345 aa8.42□□□□□ -1.06
RDH11-203ENST00000553384 SIPA1L1O43166 1804 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 ATAD5Q96QE3 1844 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 FIBPO43427 364 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 LETM1O95202 739 aaPredicted RBP8.41□□□□□ -1.06
RDH11-203ENST00000553384 HMGB1P09429 215 aaKnown RBP8.41□□□□□ -1.06
RDH11-203ENST00000553384 SHMT1P34896 483 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 EVX2Q03828 476 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 DNM1Q05193 864 aaKnown RBP8.41□□□□□ -1.06
RDH11-203ENST00000553384 MTMR2Q13614 643 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 MORN1Q5T089 497 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 Q6ZUG5 572 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 DSCC1Q9BVC3 393 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 LOC285556D6RIA3 1793 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 USP17L10C9JJH3 530 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 CDK8P49336 464 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 HERVK_113P62684 666 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 GABPAQ06546 454 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 PDE4BQ07343 736 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 STK3Q13188 491 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 ZYXQ15942 572 aaKnown RBP8.41□□□□□ -1.06
RDH11-203ENST00000553384 SBK1Q52WX2 424 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 CCDC183Q5T5S1 534 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 TMEM179Q6ZVK1 233 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 C16orf86Q6ZW13 317 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 CCAR1Q8IX12 1150 aaKnown RBP8.41□□□□□ -1.06
RDH11-203ENST00000553384 PDLIM2Q96JY6 352 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 CCDC17Q96LX7 622 aa8.41□□□□□ -1.06
RDH11-203ENST00000553384 P2RX7Q99572 595 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms