RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 RANBP2P49792 3224 aaKnown RBP4.9□□□□□ -1.62
FOXN3-203ENST00000553353 POLRMTO00411 1230 aaKnown RBP4.9□□□□□ -1.63
FOXN3-203ENST00000553353 HMGB2P26583 209 aaKnown RBP4.9□□□□□ -1.63
FOXN3-203ENST00000553353 TM4SF1P30408 202 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 MAP2K2P36507 400 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 PKN1Q16512 942 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 ZNF423Q2M1K9 1284 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 ZNF648Q5T619 568 aaPredicted RBP4.9□□□□□ -1.63
FOXN3-203ENST00000553353 CST9Q5W186 159 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 CYP4F22Q6NT55 531 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 CORO1BQ9BR76 489 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 LATS2Q9NRM7 1088 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 VIRMAQ69YN4 1812 aaKnown RBP4.9□□□□□ -1.63
FOXN3-203ENST00000553353 SBNO2Q9Y2G9 1366 aa4.9□□□□□ -1.63
FOXN3-203ENST00000553353 ITSN1Q15811 1721 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 METTL12A8MUP2 240 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 CA12O43570 354 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 AOC2O75106 756 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 ZEB1P37275 1124 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-203ENST00000553353 FBLN7Q53RD9 439 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 NBPF6Q5VWK0 638 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 MPRIPQ6WCQ1 1025 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 SPRED2Q7Z698 418 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 CNTROBQ8N137 903 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 TMEM40Q8WWA1 233 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 SMARCC1Q92922 1105 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-203ENST00000553353 NBPF4Q96M43 638 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 DDX21Q9NR30 783 aaKnown RBP eCLIP4.89□□□□□ -1.63
FOXN3-203ENST00000553353 VAV3Q9UKW4 847 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 ASAP1Q9ULH1 1129 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 AP4E1Q9UPM8 1137 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 MTMR7Q9Y216 660 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-203ENST00000553353 BRCA1P38398 1863 aaKnown RBP4.89□□□□□ -1.63
FOXN3-203ENST00000553353 MAP3K19Q56UN5 1328 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 LTBP3Q9NS15 1303 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 C5P01031 1676 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 FAM208AQ9UK61 1670 aaKnown RBP4.89□□□□□ -1.63
FOXN3-203ENST00000553353 ADAMTS7Q9UKP4 1686 aa4.89□□□□□ -1.63
FOXN3-203ENST00000553353 CD163L1Q9NR16 1453 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 UBR3Q6ZT12 1888 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 B3GALT4O96024 378 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 CTSBP07858 339 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 FUT4P22083 530 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 MAP1SQ66K74 1059 aaPredicted RBP4.88□□□□□ -1.63
FOXN3-203ENST00000553353 ZNF574Q6ZN55 896 aaPredicted RBP4.88□□□□□ -1.63
FOXN3-203ENST00000553353 NME9Q86XW9 330 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 WFDC3Q8IUB2 231 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 GALNT12Q8IXK2 581 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 GJD3Q8N144 294 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 GLIS3Q8NEA6 775 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 NETO1Q8TDF5 533 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 TCF12Q99081 682 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 LIN7BQ9HAP6 207 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 DAGLAQ9Y4D2 1042 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 HTTP42858 3142 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 N4BP2Q86UW6 1770 aaPredicted RBP4.88□□□□□ -1.63
FOXN3-203ENST00000553353 ADAMTSL1Q8N6G6 1762 aa4.88□□□□□ -1.63
FOXN3-203ENST00000553353 C4AP0C0L4 1744 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 DOT1LQ8TEK3 1739 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 A0A1W2PP55 124 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 DYNC1LI2O43237 492 aaPredicted RBP4.87□□□□□ -1.63
FOXN3-203ENST00000553353 RPS6KA4O75676 772 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 NEFLP07196 543 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 GRIA4P48058 902 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 HNRNPUQ00839 825 aaKnown RBP eCLIP4.87□□□□□ -1.63
FOXN3-203ENST00000553353 PRKCQQ04759 706 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 AP3B2Q13367 1082 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 KSR1Q8IVT5 923 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 BHLHE22Q8NFJ8 381 aaPredicted RBP4.87□□□□□ -1.63
FOXN3-203ENST00000553353 FAM168AQ92567 244 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 SLC38A3Q99624 504 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 TRIM56Q9BRZ2 755 aaKnown RBP4.87□□□□□ -1.63
FOXN3-203ENST00000553353 RC3H2Q9HBD1 1191 aaKnown RBP4.87□□□□□ -1.63
FOXN3-203ENST00000553353 MKNK2Q9HBH9 465 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 SRP68Q9UHB9 627 aaKnown RBP4.87□□□□□ -1.63
FOXN3-203ENST00000553353 SERPINA10Q9UK55 444 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 MAP2P11137 1827 aaKnown RBP4.87□□□□□ -1.63
FOXN3-203ENST00000553353 BRCA2P51587 3418 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 CGNL1Q0VF96 1302 aa4.87□□□□□ -1.63
FOXN3-203ENST00000553353 USP42Q9H9J4 1324 aaKnown RBP4.87□□□□□ -1.63
FOXN3-203ENST00000553353 VCANP13611 3396 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 FZD6O60353 706 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 FBLN1P23142 703 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 HOXC9P31274 260 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 ECE1P42892 770 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 FKBP4Q02790 459 aaKnown RBP eCLIP4.86□□□□□ -1.63
FOXN3-203ENST00000553353 PTPN12Q05209 780 aaKnown RBP4.86□□□□□ -1.63
FOXN3-203ENST00000553353 ZNF124Q15973 351 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 SPRED3Q2MJR0 410 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 KIAA0319Q5VV43 1072 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 SAPCD2Q86UD0 394 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 TTLL6Q8N841 843 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 CCDC97Q96F63 343 aaPredicted RBP4.86□□□□□ -1.63
FOXN3-203ENST00000553353 WDR18Q9BV38 432 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 CNTNAP4Q9C0A0 1308 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 CENPJQ9HC77 1338 aaPredicted RBP4.86□□□□□ -1.63
FOXN3-203ENST00000553353 CARMIL3Q8ND23 1372 aa4.86□□□□□ -1.63
FOXN3-203ENST00000553353 LAMA3Q16787 3333 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms