RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 GUCY1A2P33402 732 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 SARSP49591 514 aaKnown RBP8.29□□□□□ -1.08
BEST3-212ENST00000553096 NR1I3Q14994 352 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 FILIP1LQ4L180 1135 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 TMEM67Q5HYA8 995 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 FAM71BQ8TC56 605 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 SHISA4Q96DD7 197 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 NYXQ9GZU5 481 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 SUFUQ9UMX1 484 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
BEST3-212ENST00000553096 MYH1P12882 1939 aa8.29□□□□□ -1.08
BEST3-212ENST00000553096 ZNF646O15015 1829 aaPredicted RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 ZPR1O75312 459 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 GNAT2P19087 354 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 LIFRP42702 1097 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 ADKP55263 362 aaKnown RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 RPS8P62241 208 aaKnown RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 PPARAQ07869 468 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 GOLGA8FQ08AF8 430 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 GOLGA8DPQ0D2H9 430 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 RILPL1Q5EBL4 403 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 BEND6Q5SZJ8 279 aaPredicted RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 CNGA4Q8IV77 575 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 CCDC97Q96F63 343 aaPredicted RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 ZCCHC17Q9NP64 241 aaKnown RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 MED4Q9NPJ6 270 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 ADGRG1Q9Y653 693 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 MAGEB6P1A0A0J9YX57 407 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 ZBTB43O43298 467 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 PDE4BQ07343 736 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 SSRP1Q08945 709 aaKnown RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 KARSQ15046 597 aaKnown RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 ICE2Q659A1 982 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 MFSD6Q6ZSS7 791 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 NOSTRINQ8IVI9 506 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 NSUN4Q96CB9 384 aaKnown RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 TOMM22Q9NS69 142 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 ANAPC4Q9UJX5 808 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 JAG2Q9Y219 1238 aa8.28□□□□□ -1.08
BEST3-212ENST00000553096 RRP15Q9Y3B9 282 aaKnown RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 BAZ2BQ9UIF8 2168 aaKnown RBP8.28□□□□□ -1.08
BEST3-212ENST00000553096 CTAGE15A4D2H0 777 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 GOLGA8AA7E2F4 631 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 H3BQF6 201 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 IFIT3O14879 490 aaKnown RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 CTAGE8P0CG41 777 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 PTPREP23469 700 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 MECOMQ03112 1051 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 NFIXQ14938 502 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 SEC23AQ15436 765 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 RRP12Q5JTH9 1297 aaKnown RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 LRCH2Q5VUJ6 765 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 RASGRP2Q7LDG7 609 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 CTAGE6Q86UF2 777 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 POTEDQ86YR6 584 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 FOXP4Q8IVH2 680 aaPredicted RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 CTAGE4Q8IX94 777 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 CMTR1Q8N1G2 835 aaKnown RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 CTCFLQ8NI51 663 aaPredicted RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 CLIC6Q96NY7 704 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 NLRP3Q96P20 1036 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 EPC1Q9H2F5 836 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 ANKZF1Q9H8Y5 726 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 VPS18Q9P253 973 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 L1RE1Q9UN81 338 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 ITIH6Q6UXX5 1313 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 BMP6P22004 513 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 FECHP22830 423 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 PRDX5P30044 214 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 TRIM14Q14142 442 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 SPATA1Q5VX52 437 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 NAPGQ99747 312 aaPredicted RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 KRT23Q9C075 422 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 FOXP1Q9H334 677 aaPredicted RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 CNNM2Q9H8M5 875 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 VIPAS39Q9H9C1 493 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 MRPL44Q9H9J2 332 aaKnown RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 PDE11AQ9HCR9 933 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 MYH8P13535 1937 aa8.27□□□□□ -1.09
BEST3-212ENST00000553096 PDS5AQ29RF7 1337 aaKnown RBP8.27□□□□□ -1.09
BEST3-212ENST00000553096 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
BEST3-212ENST00000553096 GUCY2CP25092 1073 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 GRIK5Q16478 980 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 MAP9Q49MG5 647 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 CAVIN4Q5BKX8 364 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 NFXL1Q6ZNB6 911 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 TMTC1Q8IUR5 882 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 NME8Q8N427 588 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 IGSF22Q8N9C0 903 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 GPR101Q96P66 508 aaPredicted RBP8.26□□□□□ -1.09
BEST3-212ENST00000553096 DESI2Q9BSY9 194 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.26□□□□□ -1.09
BEST3-212ENST00000553096 QSER1Q2KHR3 1735 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 MINDY4BA8MYZ0 360 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 KIF1CO43896 1103 aaKnown RBP8.26□□□□□ -1.09
BEST3-212ENST00000553096 MFAP3LO75121 409 aa8.26□□□□□ -1.09
BEST3-212ENST00000553096 COQ9O75208 318 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms