RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 Q96M66 194 aa6.26□□□□□ -1.41
HCFC2-206ENST00000552343 TRIM55Q9BYV6 548 aa6.26□□□□□ -1.41
HCFC2-206ENST00000552343 XYLT2Q9H1B5 865 aa6.26□□□□□ -1.41
HCFC2-206ENST00000552343 RFXAPO00287 272 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 NFKB2Q00653 900 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 EGR3Q06889 387 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 RBL2Q08999 1139 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 SSPNQ14714 243 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 NFE2L2Q16236 605 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 TMEM151BQ8IW70 566 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 OXR1Q8N573 874 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 DHX38Q92620 1227 aaKnown RBP6.25□□□□□ -1.41
HCFC2-206ENST00000552343 CWC22Q9HCG8 908 aaKnown RBP6.25□□□□□ -1.41
HCFC2-206ENST00000552343 BRMS1Q9HCU9 246 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 YBX2Q9Y2T7 364 aaKnown RBP6.25□□□□□ -1.41
HCFC2-206ENST00000552343 SLC12A7Q9Y666 1083 aa6.25□□□□□ -1.41
HCFC2-206ENST00000552343 FITM1A5D6W6 292 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 ATE1O95260 518 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 GRK4P32298 578 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 PDE6BP35913 854 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 CRKP46108 304 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 NR0B2Q15466 257 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 GK5Q6ZS86 529 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 DNAJC2Q99543 621 aaKnown RBP6.24□□□□□ -1.41
HCFC2-206ENST00000552343 EHMT1Q9H9B1 1298 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 DUSP13Q9UII6 198 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 ADAM30Q9UKF2 790 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 ZNRF3Q9ULT6 936 aa6.24□□□□□ -1.41
HCFC2-206ENST00000552343 OTOL1A6NHN0 477 aaPredicted RBP6.23□□□□□ -1.41
HCFC2-206ENST00000552343 CANXP27824 592 aaKnown RBP6.23□□□□□ -1.41
HCFC2-206ENST00000552343 YARSP54577 528 aaKnown RBP6.23□□□□□ -1.41
HCFC2-206ENST00000552343 CHMP4BP1P59074 171 aa6.23□□□□□ -1.41
HCFC2-206ENST00000552343 PANK1Q8TE04 598 aa6.23□□□□□ -1.41
HCFC2-206ENST00000552343 ANAPC16Q96DE5 110 aa6.23□□□□□ -1.41
HCFC2-206ENST00000552343 DPH2Q9BQC3 489 aaPredicted RBP6.23□□□□□ -1.41
HCFC2-206ENST00000552343 TRIT1Q9H3H1 467 aaKnown RBP6.23□□□□□ -1.41
HCFC2-206ENST00000552343 PRKAG3Q9UGI9 489 aa6.23□□□□□ -1.41
HCFC2-206ENST00000552343 PCDHB14Q9Y5E9 798 aa6.23□□□□□ -1.41
HCFC2-206ENST00000552343 SASH1O94885 1247 aa6.22□□□□□ -1.41
HCFC2-206ENST00000552343 PLCG1P19174 1290 aa6.22□□□□□ -1.41
HCFC2-206ENST00000552343 ETV3P41162 512 aa6.22□□□□□ -1.41
HCFC2-206ENST00000552343 NOP9Q86U38 636 aaKnown RBP6.22□□□□□ -1.41
HCFC2-206ENST00000552343 RBBP8NLQ8NC74 664 aaPredicted RBP6.22□□□□□ -1.41
HCFC2-206ENST00000552343 FBXO27Q8NI29 283 aa6.22□□□□□ -1.41
HCFC2-206ENST00000552343 PMFBP1Q8TBY8 1022 aa6.22□□□□□ -1.41
HCFC2-206ENST00000552343 TM9SF2Q99805 663 aa6.22□□□□□ -1.41
HCFC2-206ENST00000552343 SIRPGQ9P1W8 387 aa6.22□□□□□ -1.41
HCFC2-206ENST00000552343 PRR36Q9H6K5 1346 aa6.22□□□□□ -1.41
HCFC2-206ENST00000552343 HTR3BO95264 441 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 CELA3BP08861 270 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 PI3P19957 117 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 GIPRP48546 466 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 TSPYL5Q86VY4 417 aaPredicted RBP6.21□□□□□ -1.42
HCFC2-206ENST00000552343 C19orf47Q8N9M1 422 aaKnown RBP6.21□□□□□ -1.42
HCFC2-206ENST00000552343 DNAJB8Q8NHS0 232 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 GPR62Q9BZJ7 368 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 ZNF408Q9H9D4 720 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 GPATCH2Q9NW75 528 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 GMIPQ9P107 970 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 TJP2Q9UDY2 1190 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 GPR160Q9UJ42 338 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 PPT2Q9UMR5 302 aa6.21□□□□□ -1.42
HCFC2-206ENST00000552343 GFRA2O00451 464 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 GRIN3BO60391 1043 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 PGRP06401 933 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 GALK1P51570 392 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 SNX17Q15036 470 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 ANKS3Q6ZW76 656 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 DPH6Q7L8W6 267 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 MRPL41Q8IXM3 137 aaKnown RBP6.2□□□□□ -1.42
HCFC2-206ENST00000552343 SHISA4Q96DD7 197 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 OSBPL2Q9H1P3 480 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 ACTR10Q9NZ32 417 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 EBF1Q9UH73 591 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
HCFC2-206ENST00000552343 MEIS3P2A8K0S8 358 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 ADRB1P08588 477 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 LTKP29376 864 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 CLCQ05315 142 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 FXNQ16595 210 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 TMEM201Q5SNT2 666 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 CCDC81Q6ZN84 652 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 SPPL2CQ8IUH8 684 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 TAB3Q8N5C8 712 aaPredicted RBP6.19□□□□□ -1.42
HCFC2-206ENST00000552343 FEZF2Q8TBJ5 459 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 MKL1Q969V6 931 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 DACT3Q96B18 629 aaPredicted RBP6.19□□□□□ -1.42
HCFC2-206ENST00000552343 SHDQ96IW2 340 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 SIGLEC10Q96LC7 697 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 REV1Q9UBZ9 1251 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 MBD1Q9UIS9 605 aaPredicted RBP6.19□□□□□ -1.42
HCFC2-206ENST00000552343 MRVI1Q9Y6F6 885 aa6.19□□□□□ -1.42
HCFC2-206ENST00000552343 PSPNO60542 156 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 RAG1P15918 1043 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 CCNFP41002 786 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 AFF3P51826 1226 aaKnown RBP6.18□□□□□ -1.42
HCFC2-206ENST00000552343 CHRNEQ04844 493 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 PPP2R5EQ16537 467 aa6.18□□□□□ -1.42
HCFC2-206ENST00000552343 SLC6A19Q695T7 634 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms