RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 ATP11BQ9Y2G3 1177 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 EYSQ5T1H1 3165 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 SALL3Q9BXA9 1300 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 PATL2C9JE40 543 aaKnown RBP19.24■□□□□ 0.67
CALCOCO1-220ENST00000552282 FDX1P10109 184 aa19.24■□□□□ 0.67
CALCOCO1-220ENST00000552282 ADCYAP1R1P41586 468 aa19.24■□□□□ 0.67
CALCOCO1-220ENST00000552282 TRIM60Q495X7 471 aa19.24■□□□□ 0.67
CALCOCO1-220ENST00000552282 ANO1Q5XXA6 986 aa19.24■□□□□ 0.67
CALCOCO1-220ENST00000552282 SLC17A8Q8NDX2 589 aa19.24■□□□□ 0.67
CALCOCO1-220ENST00000552282 M0R2C6 588 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 ERC2O15083 957 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 CST5P28325 142 aaPredicted RBP19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 TDO2P48775 406 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 SNRNP48Q6IEG0 339 aaKnown RBP19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 IFNL3Q8IZI9 196 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 NEDD1Q8NHV4 660 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 CEP95Q96GE4 821 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 NUP88Q99567 741 aaPredicted RBP19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 FBXO40Q9UH90 709 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 FEM1BQ9UK73 627 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
CALCOCO1-220ENST00000552282 MINDY4BA8MYZ0 360 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 TTLL1O95922 423 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 TAL1P17542 331 aaPredicted RBP19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 NKX3-2P78367 333 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 ZMYM1Q5SVZ6 1142 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 TSHZ3Q63HK5 1081 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 CCSAPQ6IQ19 270 aaPredicted RBP19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 KLHDC9Q8NEP7 349 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 CHST13Q8NET6 341 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 TOX2Q96NM4 488 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 RIPK3Q9Y572 518 aa19.22■□□□□ 0.67
CALCOCO1-220ENST00000552282 A0A1W2PQ45 241 aaPredicted RBP19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 A0A1W2PQY0 241 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 TRIM43BA6NCK2 446 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 MOXD2PA6NHM9 499 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 LRRC37A2A6NM11 1700 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 KIAA0355O15063 1070 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 PLA2G6O60733 806 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 SNAI1O95863 264 aaPredicted RBP19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 PPP4R3BQ5MIZ7 849 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 ANKRD33Q7Z3H0 272 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 ZNF444Q8N0Y2 327 aaPredicted RBP19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 TRIM43Q96BQ3 446 aaPredicted RBP19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 GMCL1Q96IK5 515 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 FGD4Q96M96 766 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 NACAP1Q9BZK3 213 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 TACC3Q9Y6A5 838 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 SYNRGQ9UMZ2 1314 aa19.21■□□□□ 0.67
CALCOCO1-220ENST00000552282 ZBED4O75132 1171 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 DUSP11O75319 330 aaKnown RBP19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 NOVP48745 357 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 SMAD3P84022 425 aaKnown RBP19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 TLE2Q04725 743 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 PDE4BQ07343 736 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 SAMD1Q6SPF0 538 aaPredicted RBP19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 GUCD1Q96NT3 240 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 FAM184BQ9ULE4 1060 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 PCDHB15Q9Y5E8 787 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 MCM3APO60318 1980 aa19.2■□□□□ 0.66
CALCOCO1-220ENST00000552282 FOXP2O15409 715 aa19.19■□□□□ 0.66
CALCOCO1-220ENST00000552282 PGK1P00558 417 aa19.19■□□□□ 0.66
CALCOCO1-220ENST00000552282 CLTBP09497 229 aa19.19■□□□□ 0.66
CALCOCO1-220ENST00000552282 SH3RF1Q7Z6J0 888 aa19.19■□□□□ 0.66
CALCOCO1-220ENST00000552282 BADQ92934 168 aa19.19■□□□□ 0.66
CALCOCO1-220ENST00000552282 FERMT2Q96AC1 680 aa19.19■□□□□ 0.66
CALCOCO1-220ENST00000552282 UPF3AQ9H1J1 476 aaKnown RBP19.19■□□□□ 0.66
CALCOCO1-220ENST00000552282 ABHD16BQ9H3Z7 469 aa19.19■□□□□ 0.66
CALCOCO1-220ENST00000552282 TMEM265A0A087WTH1 108 aa19.18■□□□□ 0.66
CALCOCO1-220ENST00000552282 BMP3P12645 472 aa19.18■□□□□ 0.66
CALCOCO1-220ENST00000552282 SHHQ15465 462 aa19.18■□□□□ 0.66
CALCOCO1-220ENST00000552282 C9orf50Q5SZB4 431 aa19.18■□□□□ 0.66
CALCOCO1-220ENST00000552282 DDX11Q96FC9 970 aa19.18■□□□□ 0.66
CALCOCO1-220ENST00000552282 KATNBL1Q9H079 304 aa19.18■□□□□ 0.66
CALCOCO1-220ENST00000552282 ELP1O95163 1332 aa19.18■□□□□ 0.66
CALCOCO1-220ENST00000552282 VCANP13611 3396 aa19.18■□□□□ 0.66
CALCOCO1-220ENST00000552282 PRUNE2Q8WUY3 3088 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 RAD21O60216 631 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 PRDM1O75626 825 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 SLC3A2P08195 630 aaKnown RBP19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 MX1P20591 662 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 STAT2P52630 851 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 ACLYP53396 1101 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 PPARAQ07869 468 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 FAM160B2Q86V87 743 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 NUP133Q8WUM0 1156 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 KIFC2Q96AC6 838 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 SEC62Q99442 399 aaKnown RBP19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 NAPBQ9H115 298 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 PRDM5Q9NQX1 630 aaPredicted RBP19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 ANAPC4Q9UJX5 808 aa19.17■□□□□ 0.66
CALCOCO1-220ENST00000552282 DLL1O00548 723 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 APPP05067 770 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 FGRP09769 529 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 TSPY3P0CV98 308 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms