RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 PLEKHD1A6NEE1 506 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 GPR39O43194 453 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 KATNA1O75449 491 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 ITGA4P13612 1032 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 CPEP16870 476 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 ASPAP45381 313 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 RNF4P78317 190 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 MTMR1Q13613 665 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 SEPT7Q16181 437 aaKnown RBP5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 TRAPPC3LQ5T215 181 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 WWC2Q6AWC2 1192 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 GTF2IRD2BQ6EKJ0 949 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 DYMQ7RTS9 669 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 GTF2IRD2Q86UP8 949 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 SYTL5Q8TDW5 730 aaPredicted RBP5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 XAGE3Q8WTP9 111 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 PTPRN2Q92932 1015 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 CCDC140Q96MF4 163 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 ORAI3Q9BRQ5 295 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 NKX2-4Q9H2Z4 354 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 PRR13Q9NZ81 148 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 NDOR1Q9UHB4 597 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 TCEAL9Q9UHQ7 104 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 PCOLCE2Q9UKZ9 415 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 DIS3Q9Y2L1 958 aaKnown RBP5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 FHOD1Q9Y613 1164 aa5.5□□□□□ -1.53
LSM6P2-201ENST00000552208 LOC102724159A0A0B4J2E5 919 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 BLACEA4D250 179 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 PRC1O43663 620 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 RNGTTO60942 597 aaKnown RBP5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 SLITRK5O94991 958 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 KCNH1O95259 989 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 BPIP17213 487 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 KCNA6P17658 529 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 HOXC12P31275 282 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 STRN3Q13033 797 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 GRB10Q13322 594 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 STAT4Q14765 748 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 PWP2Q15269 919 aaKnown RBP5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 RNF219Q5W0B1 726 aaPredicted RBP5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 DENND5AQ6IQ26 1287 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 LETMD1Q6P1Q0 360 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 IGF2-ASQ6U949 168 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 ACAD11Q709F0 780 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 MAMDC2Q7Z304 686 aaPredicted RBP5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 CRACR2BQ8N4Y2 399 aaPredicted RBP5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 TMEM145Q8NBT3 493 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 ADCY4Q8NFM4 1077 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 WDR66Q8TBY9 1149 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 RNF141Q8WVD5 230 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 BRF1Q92994 677 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 ASPNQ9BXN1 380 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 ACSS3Q9H6R3 686 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 PIDD1Q9HB75 910 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 SLC5A4Q9NY91 659 aa5.49□□□□□ -1.53
LSM6P2-201ENST00000552208 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 TPD52L2O43399 206 aaKnown RBP5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 BRINP1O60477 761 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 RASGRP1O95267 797 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 APBA3O96018 575 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 CELA2BP08218 269 aaPredicted RBP5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 IGFALSP35858 605 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 LRRC41Q15345 812 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 ANKLE2Q86XL3 938 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 CCDC146Q8IYE0 955 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 TMEM130Q8N3G9 435 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 C12orf50Q8NA57 414 aaPredicted RBP5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 KREMEN2Q8NCW0 462 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 KCTD13Q8WZ19 329 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 TRIM11Q96F44 468 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 TRIM8Q9BZR9 551 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 PRDM14Q9GZV8 571 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 CYP26B1Q9NR63 512 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 ENAMQ9NRM1 1142 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 PCDHB12Q9Y5F1 795 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 ASXL2Q76L83 1435 aa5.48□□□□□ -1.53
LSM6P2-201ENST00000552208 SHTN1A0MZ66 631 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 RNF225M0QZC1 329 aaPredicted RBP5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 PIK3R2O00459 728 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 KIF3BO15066 747 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 OPA1O60313 960 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 JMJD7P0C870 316 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 RAB27AP51159 221 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 NEK2P51955 445 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 NEK4P51957 841 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 RAC1P63000 192 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 SNW1Q13573 536 aaKnown RBP5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 PPP2R5AQ15172 486 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 CDCA2Q69YH5 1023 aaPredicted RBP5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 ANKRD34AQ69YU3 496 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 STYK1Q6J9G0 422 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 GPAT2Q6NUI2 795 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 LYPD4Q6UWN0 246 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 LINC00114Q6XXX2 140 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 CDH24Q86UP0 819 aa5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 MAGEB10Q96LZ2 347 aaPredicted RBP5.47□□□□□ -1.53
LSM6P2-201ENST00000552208 PUS7LQ9H0K6 701 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms