RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, human

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-208	ENST00000551855	ATF4	P18848	351 aa	Predicted RBP	4.62	□□□□□ -1.67
CPNE8-208	ENST00000551855	FAM160A1	Q05DH4	1040 aa		4.62	□□□□□ -1.67
CPNE8-208	ENST00000551855	AGMO	Q6ZNB7	445 aa		4.62	□□□□□ -1.67
CPNE8-208	ENST00000551855	TLR6	Q9Y2C9	796 aa		4.62	□□□□□ -1.67
CPNE8-208	ENST00000551855	MRVI1	Q9Y6F6	885 aa		4.62	□□□□□ -1.67
CPNE8-208	ENST00000551855	IRS4	O14654	1257 aa	Predicted RBP	4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	TFE3	P19532	575 aa	Predicted RBP	4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	CDR1	P51861	262 aa		4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	RPS26	P62854	115 aa	Known RBP	4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	PDE4B	Q07343	736 aa		4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	DUSP4	Q13115	394 aa		4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	GNL2	Q13823	731 aa	Known RBP	4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	KIR3DS1	Q14943	382 aa		4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	CYB5D2	Q8WUJ1	264 aa		4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	RNF141	Q8WVD5	230 aa		4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	JARID2	Q92833	1246 aa	Predicted RBP	4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	SYTL4	Q96C24	671 aa	Predicted RBP	4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	EAF1	Q96JC9	268 aa	Predicted RBP	4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	ZSWIM4	Q9H7M6	989 aa		4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	ADAM30	Q9UKF2	790 aa		4.61	□□□□□ -1.67
CPNE8-208	ENST00000551855	HSP90B1	P14625	803 aa	Known RBP	4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	LMNB1	P20700	586 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	RPL10	P27635	214 aa	Known RBP	4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	GBP2	P32456	591 aa	Predicted RBP	4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	ETFB	P38117	255 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	GJA8	P48165	433 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	LIG3	P49916	1009 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	RBL2	Q08999	1139 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	BMS1	Q14692	1282 aa	Known RBP	4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	CCDC85B	Q15834	202 aa	Predicted RBP	4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	CNKSR3	Q6P9H4	555 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	ZPBP2	Q6X784	338 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	FAM129C	Q86XR2	697 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	USHBP1	Q8N6Y0	703 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	FAM13C	Q8NE31	585 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	GPRASP2	Q96D09	838 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	SPON2	Q9BUD6	331 aa		4.6	□□□□□ -1.67
CPNE8-208	ENST00000551855	PPM1G	O15355	546 aa	Predicted RBP	4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	NRDC	O43847	1150 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	PRICKLE3	O43900	615 aa	Predicted RBP	4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	STK10	O94804	968 aa	Known RBP	4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	INSRR	P14616	1297 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	PLCG1	P19174	1290 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	ITGAE	P38570	1179 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	NASP	P49321	788 aa	Predicted RBP	4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	ST13	P50502	369 aa	Known RBP	4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	RPL6	Q02878	288 aa	Known RBP	4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	EFEMP1	Q12805	493 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	FBXL19	Q6PCT2	694 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	IGDCC3	Q8IVU1	814 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	NLGN1	Q8N2Q7	840 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	KREMEN1	Q96MU8	473 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	PLCD4	Q9BRC7	762 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	MIR1-1HG	Q9H1L0	117 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	GINM1	Q9NU53	330 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	ZMYM5	Q9UJ78	669 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	EFR3B	Q9Y2G0	817 aa		4.59	□□□□□ -1.67
CPNE8-208	ENST00000551855	CHURC1-FNTB	B4DL54	471 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	HRK	O00198	91 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	PF4	P02776	101 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	YBX1	P67809	324 aa	Known RBP	4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	PLP2	Q04941	152 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	CEP128	Q6ZU80	1094 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	WAPL	Q7Z5K2	1190 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	JAZF1	Q86VZ6	243 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	FBXO27	Q8NI29	283 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	MZB1	Q8WU39	189 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	MAP6	Q96JE9	813 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	TEPSIN	Q96N21	525 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	BDH2	Q9BUT1	245 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	FOXP3	Q9BZS1	431 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	ZNF408	Q9H9D4	720 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	CRTAC1	Q9NQ79	661 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	UBP1	Q9NZI7	540 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	KLHL14	Q9P2G3	628 aa		4.58	□□□□□ -1.68
CPNE8-208	ENST00000551855	TLDC2	A0PJX2	215 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	TMEM82	A0PJX8	343 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	TLR3	O15455	904 aa	Known RBP	4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	CILP	O75339	1184 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	GART	P22102	1010 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	EIF4A3	P38919	411 aa	Known RBP	4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	CRK	P46108	304 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	NCKAP1L	P55160	1127 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	KRTAP1-1	Q07627	177 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	RTP5	Q14D33	572 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	SLC14A2	Q15849	920 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	CLEC16A	Q2KHT3	1053 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	SPATS1	Q496A3	300 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	TMEM201	Q5SNT2	666 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	CCDC81	Q6ZN84	652 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	LDHD	Q86WU2	507 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	VPS37D	Q86XT2	251 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	RELL1	Q8IUW5	271 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	KIAA0825	Q8IV33	1275 aa		4.57	□□□□□ -1.68
CPNE8-208	ENST00000551855	SP8	Q8IXZ3	490 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms