RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TMTC2Q8N394 836 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 ENAHQ8N8S7 591 aaPredicted RBP12.45□□□□□ -0.42
PTCH1-225ENST00000551845 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 MTA3Q9BTC8 594 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 HTATIP2Q9BUP3 242 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 BTBD7Q9P203 1132 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 SRRDQ9UH36 339 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 TAF6LQ9Y6J9 622 aa12.45□□□□□ -0.42
PTCH1-225ENST00000551845 TRIOBPQ9H2D6 2365 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 ZSWIM8A7E2V4 1837 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 CNMDO75829 334 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 CTGFP29279 349 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 HSPA4P34932 840 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 STAT3P40763 770 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 STAT2P52630 851 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 WTAPQ15007 396 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 MTFR1Q15390 333 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 WDR78Q5VTH9 848 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 CHST3Q7LGC8 479 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 PNMA1Q8ND90 353 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 RAET1EQ8TD07 263 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 USP26Q9BXU7 913 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 SPATC1LQ9H0A9 340 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 NR2E3Q9Y5X4 410 aa12.44□□□□□ -0.42
PTCH1-225ENST00000551845 CENPFP49454 3210 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 SLC25A27O95847 323 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 HMGB1P09429 215 aaKnown RBP12.43□□□□□ -0.42
PTCH1-225ENST00000551845 PDHBP11177 359 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 TMEM132BQ14DG7 1078 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 SEC23AQ15436 765 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 GPATCH4Q5T3I0 446 aaKnown RBP12.43□□□□□ -0.42
PTCH1-225ENST00000551845 PLEKHH3Q7Z736 793 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 MB21D2Q8IYB1 491 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-225ENST00000551845 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 IGDCC4Q8TDY8 1250 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 SHISA4Q96DD7 197 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 TMEM87BQ96K49 555 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 MOV10L1Q9BXT6 1211 aaKnown RBP12.43□□□□□ -0.42
PTCH1-225ENST00000551845 MROH8Q9H579 483 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 IVNS1ABPQ9Y6Y0 642 aa12.43□□□□□ -0.42
PTCH1-225ENST00000551845 PRC1O43663 620 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 STRNO43815 780 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 SNHG28P0DPA3 235 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 ERCC3P19447 782 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 PSMA5P28066 241 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 COPB2P35606 906 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 FLT3LGP49771 235 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 TTBK2Q6IQ55 1244 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 BTNL9Q6UXG8 535 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 DHX32Q7L7V1 743 aaKnown RBP12.42□□□□□ -0.42
PTCH1-225ENST00000551845 GPR142Q7Z601 462 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 NCAPG2Q86XI2 1143 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 RIOX2Q8IUF8 465 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 SHCBP1Q8NEM2 672 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 KCNB2Q92953 911 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 PORCNQ9H237 461 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 SLC38A10Q9HBR0 1119 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 GJD2Q9UKL4 321 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 GTF3C3Q9Y5Q9 886 aa12.42□□□□□ -0.42
PTCH1-225ENST00000551845 PHIPQ8WWQ0 1821 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 FRMPD2Q68DX3 1309 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-225ENST00000551845 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
PTCH1-225ENST00000551845 PTPREP23469 700 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 LIFRP42702 1097 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 SLC4A3P48751 1232 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 OAZ1P54368 228 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 ANTXR2P58335 489 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 PRKCZQ05513 592 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 ZNF543Q08ER8 600 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 IRF5Q13568 498 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 CATIPQ7Z7H3 387 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 TEX13BQ9BXU2 312 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 RAVER2Q9HCJ3 691 aaKnown RBP12.41□□□□□ -0.42
PTCH1-225ENST00000551845 BIN2Q9UBW5 565 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-225ENST00000551845 PRR12Q9ULL5 1215 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 GABRQQ9UN88 632 aa12.41□□□□□ -0.42
PTCH1-225ENST00000551845 CCDC69A6NI79 296 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 SLC15A5A6NIM6 579 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 GOLGA8HP0CJ92 632 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 CYP2B6P20813 491 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 GRK4P32298 578 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 SLC16A2P36021 539 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-225ENST00000551845 FGD1P98174 961 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 EXOSC10Q01780 885 aaKnown RBP12.4□□□□□ -0.42
PTCH1-225ENST00000551845 ADCK5Q3MIX3 580 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 ASPRV1Q53RT3 343 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 SYDE2Q5VT97 1194 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 SYNE3Q6ZMZ3 975 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 DPP9Q86TI2 863 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 REPS2Q8NFH8 660 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 PXYLP1Q8TE99 480 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms