RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 TMC4Q7Z404 712 aa23.71■■□□□ 1.39
NPAS3-210ENST00000551492 CNNM3Q8NE01 707 aa23.71■■□□□ 1.39
NPAS3-210ENST00000551492 IFIT3O14879 490 aaKnown RBP23.71■■□□□ 1.39
NPAS3-210ENST00000551492 PPFIA4O75335 1185 aa23.71■■□□□ 1.39
NPAS3-210ENST00000551492 URI1O94763 535 aaPredicted RBP23.71■■□□□ 1.39
NPAS3-210ENST00000551492 PEX19P40855 299 aa23.71■■□□□ 1.39
NPAS3-210ENST00000551492 RHBDL3P58872 404 aa23.71■■□□□ 1.39
NPAS3-210ENST00000551492 ODF2LQ9ULJ1 636 aa23.71■■□□□ 1.39
NPAS3-210ENST00000551492 GJA3Q9Y6H8 435 aa23.71■■□□□ 1.39
NPAS3-210ENST00000551492 VPS37CA5D8V6 355 aaPredicted RBP23.7■■□□□ 1.39
NPAS3-210ENST00000551492 EIF6P56537 245 aaKnown RBP23.7■■□□□ 1.39
NPAS3-210ENST00000551492 CDAN1Q8IWY9 1227 aa23.7■■□□□ 1.39
NPAS3-210ENST00000551492 NUP133Q8WUM0 1156 aa23.7■■□□□ 1.39
NPAS3-210ENST00000551492 PARD6BQ9BYG5 372 aa23.7■■□□□ 1.39
NPAS3-210ENST00000551492 SMC3Q9UQE7 1217 aa23.7■■□□□ 1.39
NPAS3-210ENST00000551492 WWC2Q6AWC2 1192 aa23.7■■□□□ 1.38
NPAS3-210ENST00000551492 ARMCX6Q7L4S7 300 aa23.7■■□□□ 1.38
NPAS3-210ENST00000551492 ZBTB10Q96DT7 871 aa23.7■■□□□ 1.38
NPAS3-210ENST00000551492 G3BP2Q9UN86 482 aaKnown RBP23.7■■□□□ 1.38
NPAS3-210ENST00000551492 USP17L3A6NCW0 530 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 USP17L4A6NCW7 530 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 FANCGO15287 622 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 TBC1D25Q3MII6 688 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 USP17L1Q7RTZ2 530 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 PRMT6Q96LA8 375 aaPredicted RBP23.69■■□□□ 1.38
NPAS3-210ENST00000551492 AIFM3Q96NN9 605 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 RTN2O75298 545 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 TMEM67Q5HYA8 995 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 MICAL1Q8TDZ2 1067 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 DNAJC25Q9H1X3 360 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 GOLGA8BA8MQT2 603 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 MYO1FO00160 1098 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 CRKP46108 304 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 CCDC96Q2M329 555 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 PODNQ7Z5L7 613 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 HOMER1Q86YM7 354 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 PHKBQ93100 1093 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 BAG1Q99933 345 aaPredicted RBP23.69■■□□□ 1.38
NPAS3-210ENST00000551492 SH3GL3Q99963 347 aa23.69■■□□□ 1.38
NPAS3-210ENST00000551492 LTBP1Q14766 1721 aa23.68■■□□□ 1.38
NPAS3-210ENST00000551492 PDIA3P30101 505 aaKnown RBP23.68■■□□□ 1.38
NPAS3-210ENST00000551492 GCKP35557 465 aa23.68■■□□□ 1.38
NPAS3-210ENST00000551492 SF3A1Q15459 793 aaKnown RBP23.68■■□□□ 1.38
NPAS3-210ENST00000551492 APOBEC3HQ6NTF7 200 aaKnown RBP23.68■■□□□ 1.38
NPAS3-210ENST00000551492 CDC42EP5Q6NZY7 148 aa23.68■■□□□ 1.38
NPAS3-210ENST00000551492 ARHGAP27Q6ZUM4 889 aa23.68■■□□□ 1.38
NPAS3-210ENST00000551492 MAP3K11Q16584 847 aa23.68■■□□□ 1.38
NPAS3-210ENST00000551492 ANKRD23Q86SG2 305 aa23.68■■□□□ 1.38
NPAS3-210ENST00000551492 SUGCTQ9HAC7 445 aa23.68■■□□□ 1.38
NPAS3-210ENST00000551492 BAG3O95817 575 aa23.67■■□□□ 1.38
NPAS3-210ENST00000551492 KLHL23Q8NBE8 558 aa23.67■■□□□ 1.38
NPAS3-210ENST00000551492 ERCC4Q92889 916 aaPredicted RBP23.67■■□□□ 1.38
NPAS3-210ENST00000551492 RABEP2Q9H5N1 569 aa23.67■■□□□ 1.38
NPAS3-210ENST00000551492 SPATS2LQ9NUQ6 558 aaKnown RBP23.67■■□□□ 1.38
NPAS3-210ENST00000551492 EPB41L2O43491 1005 aaKnown RBP23.67■■□□□ 1.38
NPAS3-210ENST00000551492 CTDNEP1O95476 244 aa23.67■■□□□ 1.38
NPAS3-210ENST00000551492 DNM1Q05193 864 aaKnown RBP23.67■■□□□ 1.38
NPAS3-210ENST00000551492 ZSCAN29Q8IWY8 852 aaPredicted RBP23.67■■□□□ 1.38
NPAS3-210ENST00000551492 FAM205AQ6ZU69 1335 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 CXCL9Q07325 125 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 ARMC2Q8NEN0 867 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 GPR75-ASB3A0A0A6YYF3 556 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 TCP10L2B9ZVM9 353 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 SYT1P21579 422 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 DLK2Q6UY11 383 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 IL17RAQ96F46 866 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 CENPFP49454 3210 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 ASTN2O75129 1339 aaPredicted RBP23.66■■□□□ 1.38
NPAS3-210ENST00000551492 FLT1P17948 1338 aa23.66■■□□□ 1.38
NPAS3-210ENST00000551492 EFCAB8A8MWE9 144 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 GNAT2P19087 354 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 CDC27P30260 824 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 RDXP35241 583 aaKnown RBP23.65■■□□□ 1.38
NPAS3-210ENST00000551492 TAOK3Q9H2K8 898 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 CPVLQ9H3G5 476 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 SPON1Q9HCB6 807 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 CCDC88AQ3V6T2 1871 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 LRRC37AA6NMS7 1700 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 PYGLP06737 847 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 ZNF165P49910 485 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 RPS6KA3P51812 740 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 IGDCC4Q8TDY8 1250 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 FAM169AQ9Y6X4 670 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 SALL1Q9NSC2 1324 aa23.65■■□□□ 1.38
NPAS3-210ENST00000551492 WDHD1O75717 1129 aaPredicted RBP23.65■■□□□ 1.38
NPAS3-210ENST00000551492 A1CFQ9NQ94 594 aaKnown RBP23.65■■□□□ 1.38
NPAS3-210ENST00000551492 TGFB2P61812 414 aa23.64■■□□□ 1.38
NPAS3-210ENST00000551492 CRYMQ14894 314 aa23.64■■□□□ 1.38
NPAS3-210ENST00000551492 TEKT1Q969V4 418 aa23.64■■□□□ 1.38
NPAS3-210ENST00000551492 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.64■■□□□ 1.38
NPAS3-210ENST00000551492 FZD1Q9UP38 647 aa23.64■■□□□ 1.38
NPAS3-210ENST00000551492 HPS5Q9UPZ3 1129 aa23.64■■□□□ 1.38
NPAS3-210ENST00000551492 MAP2K7O14733 419 aa23.64■■□□□ 1.37
NPAS3-210ENST00000551492 RAD21O60216 631 aa23.64■■□□□ 1.37
NPAS3-210ENST00000551492 IARSP41252 1262 aaKnown RBP23.64■■□□□ 1.37
NPAS3-210ENST00000551492 RWDD2BP57060 319 aa23.64■■□□□ 1.37
NPAS3-210ENST00000551492 PRAMEF18Q5VWM3 479 aa23.64■■□□□ 1.37
NPAS3-210ENST00000551492 MKNK2Q9HBH9 465 aa23.64■■□□□ 1.37
NPAS3-210ENST00000551492 CLNS1AP54105 237 aaKnown RBP23.63■■□□□ 1.37
NPAS3-210ENST00000551492 ACTN3Q08043 901 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms