RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 GSPT1P15170 499 aaKnown RBP15.48■□□□□ 0.07
NPAS3-209ENST00000551008 OLFML2BQ68BL8 750 aa15.48■□□□□ 0.07
NPAS3-209ENST00000551008 TBC1D10CQ8IV04 446 aa15.48■□□□□ 0.07
NPAS3-209ENST00000551008 ABRAQ8N0Z2 381 aa15.48■□□□□ 0.07
NPAS3-209ENST00000551008 ANKLE1Q8NAG6 615 aa15.48■□□□□ 0.07
NPAS3-209ENST00000551008 ZNF287Q9HBT7 754 aa15.48■□□□□ 0.07
NPAS3-209ENST00000551008 CWC22Q9HCG8 908 aaKnown RBP15.48■□□□□ 0.07
NPAS3-209ENST00000551008 LRRC37A2A6NM11 1700 aa15.48■□□□□ 0.07
NPAS3-209ENST00000551008 COL6A1P12109 1028 aa15.47■□□□□ 0.07
NPAS3-209ENST00000551008 CAPN2P17655 700 aa15.47■□□□□ 0.07
NPAS3-209ENST00000551008 MAML3Q96JK9 1138 aa15.47■□□□□ 0.07
NPAS3-209ENST00000551008 PRO3102Q9H379 93 aa15.47■□□□□ 0.07
NPAS3-209ENST00000551008 ATP2A1O14983 1001 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 SLC25A27O95847 323 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 PGK2P07205 417 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 SLC3A2P08195 630 aaKnown RBP15.46■□□□□ 0.07
NPAS3-209ENST00000551008 STAT3P40763 770 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 HAND2P61296 217 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 ZNF792Q3KQV3 632 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 MFSD14CQ5VZR4 134 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 SLFN13Q68D06 897 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 SLC38A10Q9HBR0 1119 aa15.46■□□□□ 0.07
NPAS3-209ENST00000551008 COLQQ9Y215 455 aaPredicted RBP15.46■□□□□ 0.07
NPAS3-209ENST00000551008 DNAJC25-GNG10A0A024R161 153 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 FCER1AP12319 257 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 HABP4Q5JVS0 413 aaKnown RBP15.45■□□□□ 0.06
NPAS3-209ENST00000551008 PRAMEF19Q5SWL8 479 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.45■□□□□ 0.06
NPAS3-209ENST00000551008 NECAB2Q7Z6G3 386 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 DPP9Q86TI2 863 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 PRPF38AQ8NAV1 312 aaKnown RBP15.45■□□□□ 0.06
NPAS3-209ENST00000551008 DPF3Q92784 378 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 KIFC2Q96AC6 838 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 CHMP4CQ96CF2 233 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 GMCL1Q96IK5 515 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 FGD4Q96M96 766 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 MMP19Q99542 508 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 HTATIP2Q9BUP3 242 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 TEX13BQ9BXU2 312 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 PCDH10Q9P2E7 1040 aa15.45■□□□□ 0.06
NPAS3-209ENST00000551008 ZNF536O15090 1300 aa15.44■□□□□ 0.06
NPAS3-209ENST00000551008 NEDD4P46934 1319 aa15.44■□□□□ 0.06
NPAS3-209ENST00000551008 TSPY2A6NKD2 308 aa15.44■□□□□ 0.06
NPAS3-209ENST00000551008 RANBP6O60518 1105 aaKnown RBP15.44■□□□□ 0.06
NPAS3-209ENST00000551008 BMP3P12645 472 aa15.44■□□□□ 0.06
NPAS3-209ENST00000551008 SNRNP48Q6IEG0 339 aaKnown RBP15.44■□□□□ 0.06
NPAS3-209ENST00000551008 RCSD1Q6JBY9 416 aa15.44■□□□□ 0.06
NPAS3-209ENST00000551008 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
NPAS3-209ENST00000551008 DDX20Q9UHI6 824 aaKnown RBP15.44■□□□□ 0.06
NPAS3-209ENST00000551008 FEM1BQ9UK73 627 aa15.44■□□□□ 0.06
NPAS3-209ENST00000551008 LAMA3Q16787 3333 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 TAL1P17542 331 aaPredicted RBP15.43■□□□□ 0.06
NPAS3-209ENST00000551008 MCCP23508 829 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 TTC22Q5TAA0 569 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 CWC27Q6UX04 472 aaKnown RBP15.43■□□□□ 0.06
NPAS3-209ENST00000551008 KCTD1Q719H9 257 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 CPXCR1Q8N123 301 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 STAG1Q8WVM7 1258 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 C11orf49Q9H6J7 331 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 STX8Q9UNK0 236 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 LTBP2Q14767 1821 aa15.43■□□□□ 0.06
NPAS3-209ENST00000551008 SZT2Q5T011 3432 aa15.42■□□□□ 0.06
NPAS3-209ENST00000551008 TMEM232C9JQI7 657 aa15.42■□□□□ 0.06
NPAS3-209ENST00000551008 AKNAD1Q5T1N1 836 aa15.42■□□□□ 0.06
NPAS3-209ENST00000551008 ANO1Q5XXA6 986 aa15.42■□□□□ 0.06
NPAS3-209ENST00000551008 TCP11L1Q9NUJ3 509 aa15.42■□□□□ 0.06
NPAS3-209ENST00000551008 PLA2G6O60733 806 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 COPB2P35606 906 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 SNAP25P60880 206 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 LRRC26Q2I0M4 334 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 RRP12Q5JTH9 1297 aaKnown RBP15.41■□□□□ 0.06
NPAS3-209ENST00000551008 TTBK2Q6IQ55 1244 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 CHRDL2Q6WN34 429 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 TMEM47Q9BQJ4 181 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 DIAPH3Q9NSV4 1193 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 DIS3Q9Y2L1 958 aaKnown RBP15.41■□□□□ 0.06
NPAS3-209ENST00000551008 MYH6P13533 1939 aa15.41■□□□□ 0.06
NPAS3-209ENST00000551008 SEPT4O43236 478 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 EVI5O60447 810 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 ZNF865P0CJ78 1059 aaPredicted RBP15.4■□□□□ 0.06
NPAS3-209ENST00000551008 CNGA1P29973 690 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 SLC1A4P43007 532 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 FXR1P51114 621 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPAS3-209ENST00000551008 STAT2P52630 851 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 OAZ1P54368 228 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 KCTD2Q14681 263 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 AGBL1Q96MI9 1066 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 TINF2Q9BSI4 451 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 DSCC1Q9BVC3 393 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 RBM27Q9P2N5 1060 aaKnown RBP15.4■□□□□ 0.06
NPAS3-209ENST00000551008 PRR12Q9ULL5 1215 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 ASTN1O14525 1302 aa15.4■□□□□ 0.06
NPAS3-209ENST00000551008 MSCO60682 206 aa15.39■□□□□ 0.05
NPAS3-209ENST00000551008 ZBED4O75132 1171 aa15.39■□□□□ 0.05
NPAS3-209ENST00000551008 SNAI1O95863 264 aaPredicted RBP15.39■□□□□ 0.05
NPAS3-209ENST00000551008 TOP1P11387 765 aaKnown RBP15.39■□□□□ 0.05
NPAS3-209ENST00000551008 BTNL9Q6UXG8 535 aa15.39■□□□□ 0.05
NPAS3-209ENST00000551008 FAM160B2Q86V87 743 aa15.39■□□□□ 0.05
NPAS3-209ENST00000551008 C7orf61Q8IZ16 206 aa15.39■□□□□ 0.05
NPAS3-209ENST00000551008 LENG1Q96BZ8 264 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms