RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 STX8Q9UNK0 236 aa28.84■■■□□ 2.21
PXN-217ENST00000550795 PRPF38AQ8NAV1 312 aaKnown RBP28.83■■■□□ 2.21
PXN-217ENST00000550795 HIP1O00291 1037 aa28.82■■■□□ 2.2
PXN-217ENST00000550795 SLC25A27O95847 323 aa28.82■■■□□ 2.2
PXN-217ENST00000550795 NECAB2Q7Z6G3 386 aa28.82■■■□□ 2.2
PXN-217ENST00000550795 KIFC2Q96AC6 838 aa28.82■■■□□ 2.2
PXN-217ENST00000550795 BMP3P12645 472 aa28.81■■■□□ 2.2
PXN-217ENST00000550795 CYP2C19P33261 490 aa28.81■■■□□ 2.2
PXN-217ENST00000550795 MFSD14CQ5VZR4 134 aa28.81■■■□□ 2.2
PXN-217ENST00000550795 TBC1D10CQ8IV04 446 aa28.81■■■□□ 2.2
PXN-217ENST00000550795 IL25Q9H293 177 aa28.81■■■□□ 2.2
PXN-217ENST00000550795 FEM1BQ9UK73 627 aa28.81■■■□□ 2.2
PXN-217ENST00000550795 PFASO15067 1338 aa28.8■■■□□ 2.2
PXN-217ENST00000550795 IGHA2P01877 340 aa28.8■■■□□ 2.2
PXN-217ENST00000550795 FCER1AP12319 257 aa28.8■■■□□ 2.2
PXN-217ENST00000550795 MCCP23508 829 aa28.8■■■□□ 2.2
PXN-217ENST00000550795 RASGRP2Q7LDG7 609 aa28.8■■■□□ 2.2
PXN-217ENST00000550795 ABRAQ8N0Z2 381 aa28.8■■■□□ 2.2
PXN-217ENST00000550795 NR2E3Q9Y5X4 410 aa28.8■■■□□ 2.2
PXN-217ENST00000550795 PLXNA1Q9UIW2 1896 aa28.79■■■□□ 2.2
PXN-217ENST00000550795 TMEM232C9JQI7 657 aa28.79■■■□□ 2.2
PXN-217ENST00000550795 EVI5O60447 810 aa28.79■■■□□ 2.2
PXN-217ENST00000550795 NOVP48745 357 aa28.79■■■□□ 2.2
PXN-217ENST00000550795 AKNAD1Q5T1N1 836 aa28.79■■■□□ 2.2
PXN-217ENST00000550795 LHX8Q68G74 356 aa28.79■■■□□ 2.2
PXN-217ENST00000550795 CPXCR1Q8N123 301 aa28.79■■■□□ 2.2
PXN-217ENST00000550795 ISY1Q9ULR0 285 aaKnown RBP28.79■■■□□ 2.2
PXN-217ENST00000550795 RIPK3Q9Y572 518 aa28.79■■■□□ 2.2
PXN-217ENST00000550795 PPP4R3BQ5MIZ7 849 aa28.78■■■□□ 2.2
PXN-217ENST00000550795 SNRNP48Q6IEG0 339 aaKnown RBP28.78■■■□□ 2.2
PXN-217ENST00000550795 MFSD6Q6ZSS7 791 aa28.78■■■□□ 2.2
PXN-217ENST00000550795 STAG1Q8WVM7 1258 aa28.78■■■□□ 2.2
PXN-217ENST00000550795 GMCL1Q96IK5 515 aa28.78■■■□□ 2.2
PXN-217ENST00000550795 MMP19Q99542 508 aa28.78■■■□□ 2.2
PXN-217ENST00000550795 ZBED4O75132 1171 aa28.77■■■□□ 2.2
PXN-217ENST00000550795 PGK2P07205 417 aa28.77■■■□□ 2.2
PXN-217ENST00000550795 SLC1A4P43007 532 aa28.77■■■□□ 2.2
PXN-217ENST00000550795 SLC4A3P48751 1232 aa28.77■■■□□ 2.2
PXN-217ENST00000550795 TRPV1Q8NER1 839 aa28.77■■■□□ 2.2
PXN-217ENST00000550795 TEX13BQ9BXU2 312 aa28.77■■■□□ 2.2
PXN-217ENST00000550795 SLC38A10Q9HBR0 1119 aa28.77■■■□□ 2.2
PXN-217ENST00000550795 RAVER2Q9HCJ3 691 aaKnown RBP28.77■■■□□ 2.2
PXN-217ENST00000550795 MTMR7Q9Y216 660 aa28.77■■■□□ 2.2
PXN-217ENST00000550795 ZNF213O14771 459 aa28.76■■■□□ 2.19
PXN-217ENST00000550795 OLFML2BQ68BL8 750 aa28.76■■■□□ 2.19
PXN-217ENST00000550795 KCTD1Q719H9 257 aa28.76■■■□□ 2.19
PXN-217ENST00000550795 C11orf49Q9H6J7 331 aa28.76■■■□□ 2.19
PXN-217ENST00000550795 LAMA3Q16787 3333 aa28.76■■■□□ 2.19
PXN-217ENST00000550795 NEDD4P46934 1319 aa28.75■■■□□ 2.19
PXN-217ENST00000550795 COL6A1P12109 1028 aa28.75■■■□□ 2.19
PXN-217ENST00000550795 MAML3Q96JK9 1138 aa28.75■■■□□ 2.19
PXN-217ENST00000550795 DSCC1Q9BVC3 393 aa28.75■■■□□ 2.19
PXN-217ENST00000550795 TCP11L1Q9NUJ3 509 aa28.75■■■□□ 2.19
PXN-217ENST00000550795 SLC5A4Q9NY91 659 aa28.75■■■□□ 2.19
PXN-217ENST00000550795 CTDP1Q9Y5B0 961 aaPredicted RBP28.75■■■□□ 2.19
PXN-217ENST00000550795 LAMA4Q16363 1823 aa28.74■■■□□ 2.19
PXN-217ENST00000550795 ATP2A1O14983 1001 aa28.74■■■□□ 2.19
PXN-217ENST00000550795 COPB2P35606 906 aa28.74■■■□□ 2.19
PXN-217ENST00000550795 STAT2P52630 851 aa28.74■■■□□ 2.19
PXN-217ENST00000550795 KCTD2Q14681 263 aa28.74■■■□□ 2.19
PXN-217ENST00000550795 RCSD1Q6JBY9 416 aa28.74■■■□□ 2.19
PXN-217ENST00000550795 C7orf61Q8IZ16 206 aa28.74■■■□□ 2.19
PXN-217ENST00000550795 TMEM47Q9BQJ4 181 aa28.74■■■□□ 2.19
PXN-217ENST00000550795 PCP11498 1178 aaKnown RBP28.73■■■□□ 2.19
PXN-217ENST00000550795 CYBAP13498 195 aa28.73■■■□□ 2.19
PXN-217ENST00000550795 CNGA1P29973 690 aa28.73■■■□□ 2.19
PXN-217ENST00000550795 IKQ13123 557 aaPredicted RBP28.73■■■□□ 2.19
PXN-217ENST00000550795 PRAMEF19Q5SWL8 479 aa28.73■■■□□ 2.19
PXN-217ENST00000550795 CHURC1Q8WUH1 139 aa28.73■■■□□ 2.19
PXN-217ENST00000550795 RNF41Q9H4P4 317 aaPredicted RBP28.73■■■□□ 2.19
PXN-217ENST00000550795 TOP1P11387 765 aaKnown RBP28.72■■■□□ 2.19
PXN-217ENST00000550795 FAM160B2Q86V87 743 aa28.72■■■□□ 2.19
PXN-217ENST00000550795 CHMLP26374 656 aa28.71■■■□□ 2.19
PXN-217ENST00000550795 SNAP25P60880 206 aa28.71■■■□□ 2.19
PXN-217ENST00000550795 ZNF792Q3KQV3 632 aa28.71■■■□□ 2.19
PXN-217ENST00000550795 ZKSCAN3Q9BRR0 538 aa28.71■■■□□ 2.19
PXN-217ENST00000550795 DDX20Q9UHI6 824 aaKnown RBP28.71■■■□□ 2.19
PXN-217ENST00000550795 DNAH12Q6ZR08 3092 aa28.7■■■□□ 2.19
PXN-217ENST00000550795 PLA2G6O60733 806 aa28.7■■■□□ 2.18
PXN-217ENST00000550795 ESR2Q92731 530 aa28.7■■■□□ 2.18
PXN-217ENST00000550795 ZMYND8Q9ULU4 1186 aaPredicted RBP28.7■■■□□ 2.18
PXN-217ENST00000550795 OAZ1P54368 228 aa28.69■■■□□ 2.18
PXN-217ENST00000550795 IMMTQ16891 758 aaKnown RBP28.69■■■□□ 2.18
PXN-217ENST00000550795 CCDC96Q2M329 555 aa28.69■■■□□ 2.18
PXN-217ENST00000550795 TTBK2Q6IQ55 1244 aa28.69■■■□□ 2.18
PXN-217ENST00000550795 DCAF4Q8WV16 495 aa28.69■■■□□ 2.18
PXN-217ENST00000550795 PRR12Q9ULL5 1215 aa28.69■■■□□ 2.18
PXN-217ENST00000550795 ZNF536O15090 1300 aa28.69■■■□□ 2.18
PXN-217ENST00000550795 KDM4AO75164 1064 aa28.68■■■□□ 2.18
PXN-217ENST00000550795 FDX1P10109 184 aa28.68■■■□□ 2.18
PXN-217ENST00000550795 AGBL1Q96MI9 1066 aa28.68■■■□□ 2.18
PXN-217ENST00000550795 TTC14Q96N46 770 aa28.68■■■□□ 2.18
PXN-217ENST00000550795 GDF15Q99988 308 aa28.68■■■□□ 2.18
PXN-217ENST00000550795 HOMER2Q9NSB8 354 aa28.68■■■□□ 2.18
PXN-217ENST00000550795 CTNNA3Q9UI47 895 aa28.68■■■□□ 2.18
PXN-217ENST00000550795 DIS3Q9Y2L1 958 aaKnown RBP28.68■■■□□ 2.18
PXN-217ENST00000550795 LTBP2Q14767 1821 aa28.68■■■□□ 2.18
PXN-217ENST00000550795 B4E1Z4 1266 aa28.67■■■□□ 2.18
PXN-217ENST00000550795 SLC16A2P36021 539 aa28.67■■■□□ 2.18
PXN-217ENST00000550795 ANO1Q5XXA6 986 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms