RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 PDCP20941 246 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 USP14P54578 494 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 BACE1P56817 501 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 PPATQ06203 517 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
CACNB3-216ENST00000550391 SLC35G1Q2M3R5 365 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
CACNB3-216ENST00000550391 ERO1BQ86YB8 467 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 CCDC82Q8N4S0 544 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 C2orf69Q8N8R5 385 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 RNF26Q9BY78 433 aaPredicted RBP16.36■□□□□ 0.21
CACNB3-216ENST00000550391 GPCPD1Q9NPB8 672 aa16.36■□□□□ 0.21
CACNB3-216ENST00000550391 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
CACNB3-216ENST00000550391 CYTH3O43739 400 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 BMP3P12645 472 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 PDIA4P13667 645 aaKnown RBP16.35■□□□□ 0.21
CACNB3-216ENST00000550391 AKAP17AQ02040 695 aaKnown RBP16.35■□□□□ 0.21
CACNB3-216ENST00000550391 MTMR2Q13614 643 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 SPICE1Q8N0Z3 855 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 WASF1Q92558 559 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 LPAR1Q92633 364 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
CACNB3-216ENST00000550391 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 RIOX1Q9H6W3 641 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 EMILIN3Q9NT22 766 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 CHMP5Q9NZZ3 219 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 RBM27Q9P2N5 1060 aaKnown RBP16.35■□□□□ 0.21
CACNB3-216ENST00000550391 MYH6P13533 1939 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 SZT2Q5T011 3432 aa16.35■□□□□ 0.21
CACNB3-216ENST00000550391 A0A0C4DFX4 3053 aa16.34■□□□□ 0.21
CACNB3-216ENST00000550391 ZNF157P51786 506 aaPredicted RBP16.34■□□□□ 0.21
CACNB3-216ENST00000550391 SH3D19Q5HYK7 790 aa16.34■□□□□ 0.21
CACNB3-216ENST00000550391 LARP1BQ659C4 914 aaKnown RBP16.34■□□□□ 0.21
CACNB3-216ENST00000550391 TTBK2Q6IQ55 1244 aa16.34■□□□□ 0.21
CACNB3-216ENST00000550391 C12orf42Q96LP6 360 aa16.34■□□□□ 0.21
CACNB3-216ENST00000550391 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
CACNB3-216ENST00000550391 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
CACNB3-216ENST00000550391 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
CACNB3-216ENST00000550391 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
CACNB3-216ENST00000550391 PTPRFP10586 1907 aa16.34■□□□□ 0.21
CACNB3-216ENST00000550391 WDR46O15213 610 aaKnown RBP16.33■□□□□ 0.2
CACNB3-216ENST00000550391 DEXIO95424 95 aa16.33■□□□□ 0.2
CACNB3-216ENST00000550391 NUCB2P80303 420 aa16.33■□□□□ 0.2
CACNB3-216ENST00000550391 PPIL2Q13356 520 aa16.33■□□□□ 0.2
CACNB3-216ENST00000550391 PKN1Q16512 942 aa16.33■□□□□ 0.2
CACNB3-216ENST00000550391 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
CACNB3-216ENST00000550391 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
CACNB3-216ENST00000550391 OPTNQ96CV9 577 aa16.33■□□□□ 0.2
CACNB3-216ENST00000550391 OTUD5Q96G74 571 aa16.33■□□□□ 0.2
CACNB3-216ENST00000550391 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.2
CACNB3-216ENST00000550391 TMEM232C9JQI7 657 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 LOC285556D6RIA3 1793 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 IRF6O14896 467 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 PLA2G6O60733 806 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 VCAM1P19320 739 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 SYT1P21579 422 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 SLC16A2P36021 539 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 ADGRF4Q8IZF3 695 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 RGS22Q8NE09 1264 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 SLC10A4Q96EP9 437 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 ALG1Q9BT22 464 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
CACNB3-216ENST00000550391 KCNH4Q9UQ05 1017 aa16.32■□□□□ 0.2
CACNB3-216ENST00000550391 CXCL11O14625 94 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 STX6O43752 255 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 STAT2P52630 851 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 HMGCS2P54868 508 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 PFKFB3Q16875 520 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-216ENST00000550391 CHURC1Q8WUH1 139 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 MTMR8Q96EF0 704 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
CACNB3-216ENST00000550391 C8orf76Q96K31 380 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 AIFM3Q96NN9 605 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 JMJD4Q9H9V9 463 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 TMOD4Q9NZQ9 345 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 FEM1BQ9UK73 627 aa16.31■□□□□ 0.2
CACNB3-216ENST00000550391 COLQQ9Y215 455 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-216ENST00000550391 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-216ENST00000550391 hCG_1642624A0A1W2PR95 340 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 H3BQV1 296 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 SLC10A3P09131 477 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 GJA5P36382 358 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 IKQ13123 557 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-216ENST00000550391 PKP1Q13835 747 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
CACNB3-216ENST00000550391 SYDE2Q5VT97 1194 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-216ENST00000550391 FAM160B2Q86V87 743 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 PIGSQ96S52 555 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
CACNB3-216ENST00000550391 PARP14Q460N5 1801 aa16.29■□□□□ 0.2
CACNB3-216ENST00000550391 SCG2P13521 617 aa16.29■□□□□ 0.2
CACNB3-216ENST00000550391 XBP1P17861 261 aa16.29■□□□□ 0.2
CACNB3-216ENST00000550391 TRIM29Q14134 588 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms