RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TRMT44Q8IYL2 757 aaKnown RBP30.46■■■□□ 2.47
CPSF6-205ENST00000550075 ENAHQ8N8S7 591 aaPredicted RBP30.46■■■□□ 2.47
CPSF6-205ENST00000550075 TEX13BQ9BXU2 312 aa30.46■■■□□ 2.47
CPSF6-205ENST00000550075 ZNF214Q9UL59 606 aaPredicted RBP30.46■■■□□ 2.47
CPSF6-205ENST00000550075 STRNO43815 780 aa30.45■■■□□ 2.47
CPSF6-205ENST00000550075 PTPREP23469 700 aa30.45■■■□□ 2.47
CPSF6-205ENST00000550075 STAT3P40763 770 aa30.45■■■□□ 2.47
CPSF6-205ENST00000550075 SART3Q15020 963 aaKnown RBP30.45■■■□□ 2.47
CPSF6-205ENST00000550075 MORN1Q5T089 497 aa30.45■■■□□ 2.47
CPSF6-205ENST00000550075 REPS2Q8NFH8 660 aa30.45■■■□□ 2.47
CPSF6-205ENST00000550075 ANKS1AQ92625 1134 aa30.45■■■□□ 2.47
CPSF6-205ENST00000550075 CHMP4CQ96CF2 233 aa30.45■■■□□ 2.47
CPSF6-205ENST00000550075 APBA2Q99767 749 aa30.45■■■□□ 2.47
CPSF6-205ENST00000550075 ERICH2A1L162 156 aa30.44■■■□□ 2.46
CPSF6-205ENST00000550075 XRCC5P13010 732 aaKnown RBP30.44■■■□□ 2.46
CPSF6-205ENST00000550075 MAP2K5Q13163 448 aa30.44■■■□□ 2.46
CPSF6-205ENST00000550075 PNMA1Q8ND90 353 aa30.44■■■□□ 2.46
CPSF6-205ENST00000550075 TMEM106CQ9BVX2 250 aa30.44■■■□□ 2.46
CPSF6-205ENST00000550075 SLC38A10Q9HBR0 1119 aa30.44■■■□□ 2.46
CPSF6-205ENST00000550075 RBBP6Q7Z6E9 1792 aaKnown RBP30.43■■■□□ 2.46
CPSF6-205ENST00000550075 SLC27A2O14975 620 aa30.43■■■□□ 2.46
CPSF6-205ENST00000550075 PDHBP11177 359 aa30.43■■■□□ 2.46
CPSF6-205ENST00000550075 ELNP15502 786 aa30.43■■■□□ 2.46
CPSF6-205ENST00000550075 CYP2B6P20813 491 aa30.43■■■□□ 2.46
CPSF6-205ENST00000550075 OAZ1P54368 228 aa30.43■■■□□ 2.46
CPSF6-205ENST00000550075 SOX10P56693 466 aa30.43■■■□□ 2.46
CPSF6-205ENST00000550075 GRB14Q14449 540 aa30.43■■■□□ 2.46
CPSF6-205ENST00000550075 IFIT1BQ5T764 474 aaKnown RBP30.43■■■□□ 2.46
CPSF6-205ENST00000550075 CREB3L3Q68CJ9 461 aa30.43■■■□□ 2.46
CPSF6-205ENST00000550075 SNRNP48Q6IEG0 339 aaKnown RBP30.43■■■□□ 2.46
CPSF6-205ENST00000550075 ATP2A1O14983 1001 aa30.42■■■□□ 2.46
CPSF6-205ENST00000550075 HMGCRP04035 888 aa30.42■■■□□ 2.46
CPSF6-205ENST00000550075 GPATCH4Q5T3I0 446 aaKnown RBP30.42■■■□□ 2.46
CPSF6-205ENST00000550075 CYB5R4Q7L1T6 521 aa30.42■■■□□ 2.46
CPSF6-205ENST00000550075 RASGRP2Q7LDG7 609 aa30.42■■■□□ 2.46
CPSF6-205ENST00000550075 ABRAQ8N0Z2 381 aa30.42■■■□□ 2.46
CPSF6-205ENST00000550075 USP6NLQ92738 828 aa30.42■■■□□ 2.46
CPSF6-205ENST00000550075 TAF6LQ9Y6J9 622 aa30.42■■■□□ 2.46
CPSF6-205ENST00000550075 SNHG28P0DPA3 235 aa30.41■■■□□ 2.46
CPSF6-205ENST00000550075 ZKSCAN1P17029 563 aaPredicted RBP30.41■■■□□ 2.46
CPSF6-205ENST00000550075 NECTIN1Q15223 517 aa30.41■■■□□ 2.46
CPSF6-205ENST00000550075 STOX1Q6ZVD7 989 aa30.41■■■□□ 2.46
CPSF6-205ENST00000550075 IFIT3O14879 490 aaKnown RBP30.4■■■□□ 2.46
CPSF6-205ENST00000550075 REC8O95072 547 aa30.4■■■□□ 2.46
CPSF6-205ENST00000550075 INHAP05111 366 aa30.4■■■□□ 2.46
CPSF6-205ENST00000550075 FCER1AP12319 257 aa30.4■■■□□ 2.46
CPSF6-205ENST00000550075 ZNF543Q08ER8 600 aa30.4■■■□□ 2.46
CPSF6-205ENST00000550075 CPXCR1Q8N123 301 aa30.4■■■□□ 2.46
CPSF6-205ENST00000550075 SLC5A4Q9NY91 659 aa30.4■■■□□ 2.46
CPSF6-205ENST00000550075 FRMPD2Q68DX3 1309 aaPredicted RBP30.4■■■□□ 2.46
CPSF6-205ENST00000550075 BTNL9Q6UXG8 535 aa30.39■■■□□ 2.46
CPSF6-205ENST00000550075 GPCPD1Q9NPB8 672 aa30.39■■■□□ 2.46
CPSF6-205ENST00000550075 PRR12Q9ULL5 1215 aa30.39■■■□□ 2.46
CPSF6-205ENST00000550075 ADORA2AP29274 412 aa30.38■■■□□ 2.45
CPSF6-205ENST00000550075 KCTD2Q14681 263 aa30.38■■■□□ 2.45
CPSF6-205ENST00000550075 SEC23AQ15436 765 aa30.38■■■□□ 2.45
CPSF6-205ENST00000550075 ASPRV1Q53RT3 343 aa30.38■■■□□ 2.45
CPSF6-205ENST00000550075 SYDE2Q5VT97 1194 aa30.38■■■□□ 2.45
CPSF6-205ENST00000550075 MB21D2Q8IYB1 491 aaPredicted RBP30.38■■■□□ 2.45
CPSF6-205ENST00000550075 MMP19Q99542 508 aa30.38■■■□□ 2.45
CPSF6-205ENST00000550075 RAVER2Q9HCJ3 691 aaKnown RBP30.38■■■□□ 2.45
CPSF6-205ENST00000550075 FBXO40Q9UH90 709 aa30.38■■■□□ 2.45
CPSF6-205ENST00000550075 KIAA0100Q14667 2235 aaKnown RBP30.37■■■□□ 2.45
CPSF6-205ENST00000550075 MYCP01106 439 aaPredicted RBP30.37■■■□□ 2.45
CPSF6-205ENST00000550075 HOXC6P09630 235 aa30.37■■■□□ 2.45
CPSF6-205ENST00000550075 DPP9Q86TI2 863 aa30.37■■■□□ 2.45
CPSF6-205ENST00000550075 MCM5P33992 734 aa30.36■■■□□ 2.45
CPSF6-205ENST00000550075 WTAPQ15007 396 aa30.36■■■□□ 2.45
CPSF6-205ENST00000550075 TMEM67Q5HYA8 995 aa30.36■■■□□ 2.45
CPSF6-205ENST00000550075 TRIB2Q92519 343 aa30.36■■■□□ 2.45
CPSF6-205ENST00000550075 MTA3Q9BTC8 594 aa30.36■■■□□ 2.45
CPSF6-205ENST00000550075 CCL5P13501 91 aa30.35■■■□□ 2.45
CPSF6-205ENST00000550075 SLC4A3P48751 1232 aa30.35■■■□□ 2.45
CPSF6-205ENST00000550075 TTBK2Q6IQ55 1244 aa30.35■■■□□ 2.45
CPSF6-205ENST00000550075 PNMA2Q9UL42 364 aa30.35■■■□□ 2.45
CPSF6-205ENST00000550075 SLC16A2P36021 539 aa30.34■■■□□ 2.45
CPSF6-205ENST00000550075 KRT32Q14532 448 aa30.34■■■□□ 2.45
CPSF6-205ENST00000550075 MTFR1Q15390 333 aa30.34■■■□□ 2.45
CPSF6-205ENST00000550075 TKFCQ3LXA3 575 aa30.34■■■□□ 2.45
CPSF6-205ENST00000550075 CHST13Q8NET6 341 aa30.34■■■□□ 2.45
CPSF6-205ENST00000550075 RNF208Q9H0X6 261 aa30.34■■■□□ 2.45
CPSF6-205ENST00000550075 PRC1O43663 620 aa30.33■■■□□ 2.45
CPSF6-205ENST00000550075 PARP1P09874 1014 aaKnown RBP30.33■■■□□ 2.45
CPSF6-205ENST00000550075 ANTXR2P58335 489 aa30.33■■■□□ 2.45
CPSF6-205ENST00000550075 MFSD14CQ5VZR4 134 aa30.33■■■□□ 2.45
CPSF6-205ENST00000550075 CCDC174Q6PII3 467 aa30.33■■■□□ 2.45
CPSF6-205ENST00000550075 RANBP17Q9H2T7 1088 aaKnown RBP30.33■■■□□ 2.45
CPSF6-205ENST00000550075 CENPFP49454 3210 aa30.33■■■□□ 2.45
CPSF6-205ENST00000550075 CHST3Q7LGC8 479 aa30.32■■■□□ 2.44
CPSF6-205ENST00000550075 TMEM87BQ96K49 555 aa30.32■■■□□ 2.44
CPSF6-205ENST00000550075 RIPK3Q9Y572 518 aa30.32■■■□□ 2.44
CPSF6-205ENST00000550075 ZNFX1Q9P2E3 1918 aaKnown RBP30.32■■■□□ 2.44
CPSF6-205ENST00000550075 EPB41L2O43491 1005 aaKnown RBP30.31■■■□□ 2.44
CPSF6-205ENST00000550075 GOLGA8HP0CJ92 632 aa30.31■■■□□ 2.44
CPSF6-205ENST00000550075 CCL14Q16627 93 aa30.31■■■□□ 2.44
CPSF6-205ENST00000550075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.31■■■□□ 2.44
CPSF6-205ENST00000550075 UNC93B1Q9H1C4 597 aa30.31■■■□□ 2.44
CPSF6-205ENST00000550075 ACAD9Q9H845 621 aa30.31■■■□□ 2.44
CPSF6-205ENST00000550075 CCPG1Q9ULG6 757 aa30.31■■■□□ 2.44
CPSF6-205ENST00000550075 ZNF536O15090 1300 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms