RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 RAVER2Q9HCJ3 691 aaKnown RBP11.57□□□□□ -0.56
HDAC7-229ENST00000549883 ISY1Q9ULR0 285 aaKnown RBP11.57□□□□□ -0.56
HDAC7-229ENST00000549883 IVNS1ABPQ9Y6Y0 642 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 B4E1Z4 1266 aa11.56□□□□□ -0.56
HDAC7-229ENST00000549883 TMEM232C9JQI7 657 aa11.56□□□□□ -0.56
HDAC7-229ENST00000549883 ZNF213O14771 459 aa11.56□□□□□ -0.56
HDAC7-229ENST00000549883 PGK2P07205 417 aa11.56□□□□□ -0.56
HDAC7-229ENST00000549883 CYP2C19P33261 490 aa11.56□□□□□ -0.56
HDAC7-229ENST00000549883 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
HDAC7-229ENST00000549883 PRPF38AQ8NAV1 312 aaKnown RBP11.56□□□□□ -0.56
HDAC7-229ENST00000549883 DIS3LQ8TF46 1054 aaKnown RBP11.56□□□□□ -0.56
HDAC7-229ENST00000549883 GMCL1Q96IK5 515 aa11.56□□□□□ -0.56
HDAC7-229ENST00000549883 CRISPLD2Q9H0B8 497 aa11.56□□□□□ -0.56
HDAC7-229ENST00000549883 RPTORQ8N122 1335 aa11.56□□□□□ -0.56
HDAC7-229ENST00000549883 SGSM2O43147 1006 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 KDM4AO75164 1064 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 TFRCP02786 760 aaKnown RBP11.55□□□□□ -0.56
HDAC7-229ENST00000549883 HOXC6P09630 235 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 SLC16A2P36021 539 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 SLC1A4P43007 532 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
HDAC7-229ENST00000549883 PRAMEF19Q5SWL8 479 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 SNRNP48Q6IEG0 339 aaKnown RBP11.55□□□□□ -0.56
HDAC7-229ENST00000549883 CENPQQ7L2Z9 268 aaPredicted RBP11.55□□□□□ -0.56
HDAC7-229ENST00000549883 MROH8Q9H579 483 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 SLC38A10Q9HBR0 1119 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 HMX1Q9NP08 348 aaPredicted RBP11.55□□□□□ -0.56
HDAC7-229ENST00000549883 TCP11L1Q9NUJ3 509 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 ZSWIM5Q9P217 1185 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 FEM1BQ9UK73 627 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 SYNPO2Q9UMS6 1093 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 ZNF536O15090 1300 aa11.55□□□□□ -0.56
HDAC7-229ENST00000549883 FRMPD2Q68DX3 1309 aaPredicted RBP11.55□□□□□ -0.56
HDAC7-229ENST00000549883 LCTP09848 1927 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 STRNO43815 780 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 TOP1P11387 765 aaKnown RBP11.54□□□□□ -0.56
HDAC7-229ENST00000549883 FCER1AP12319 257 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 COL9A3Q14050 684 aaPredicted RBP11.54□□□□□ -0.56
HDAC7-229ENST00000549883 CCDC96Q2M329 555 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 CYB5R4Q7L1T6 521 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 DPP9Q86TI2 863 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 MMP19Q99542 508 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 CPVLQ9H3G5 476 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 GPCPD1Q9NPB8 672 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 PRR12Q9ULL5 1215 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 RAD50Q92878 1312 aa11.54□□□□□ -0.56
HDAC7-229ENST00000549883 ZBED4O75132 1171 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 FARP2O94887 1054 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-229ENST00000549883 SLC25A27O95847 323 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 CYP21A2P08686 494 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 PDHBP11177 359 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 IKQ13123 557 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-229ENST00000549883 IMMTQ16891 758 aaKnown RBP11.53□□□□□ -0.56
HDAC7-229ENST00000549883 ZNF792Q3KQV3 632 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 ANO1Q5XXA6 986 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 LHX8Q68G74 356 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 CCDC174Q6PII3 467 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 STOX1Q6ZVD7 989 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 ESR2Q92731 530 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 MAML3Q96JK9 1138 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 FGD4Q96M96 766 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 RNF41Q9H4P4 317 aaPredicted RBP11.53□□□□□ -0.56
HDAC7-229ENST00000549883 HOMER2Q9NSB8 354 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 PCDH10Q9P2E7 1040 aa11.53□□□□□ -0.56
HDAC7-229ENST00000549883 ATP2A1O14983 1001 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 GOLGA8HP0CJ92 632 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 PCP11498 1178 aaKnown RBP11.52□□□□□ -0.57
HDAC7-229ENST00000549883 CYBAP13498 195 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 STAT2P52630 851 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 MFSD14CQ5VZR4 134 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 TRMT44Q8IYL2 757 aaKnown RBP11.52□□□□□ -0.57
HDAC7-229ENST00000549883 ABRAQ8N0Z2 381 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 ENAHQ8N8S7 591 aaPredicted RBP11.52□□□□□ -0.57
HDAC7-229ENST00000549883 PAWRQ96IZ0 340 aaKnown RBP11.52□□□□□ -0.57
HDAC7-229ENST00000549883 SENP2Q9HC62 589 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 CTNNA3Q9UI47 895 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 OGDHLQ9ULD0 1010 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 DDX49Q9Y6V7 483 aaKnown RBP11.52□□□□□ -0.57
HDAC7-229ENST00000549883 MYH6P13533 1939 aa11.52□□□□□ -0.57
HDAC7-229ENST00000549883 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
HDAC7-229ENST00000549883 DNAJC25-GNG10A0A024R161 153 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 PLA2G6O60733 806 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 CNGA1P29973 690 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 ZNF543Q08ER8 600 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 KCTD2Q14681 263 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 MUM1L1Q5H9M0 696 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 OLFML2BQ68BL8 750 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 CHST3Q7LGC8 479 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 FAM160B2Q86V87 743 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 DCAF4Q8WV16 495 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 RUFY2Q8WXA3 655 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 MAP4K1Q92918 833 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 CCDC136Q96JN2 1154 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 TTC14Q96N46 770 aa11.51□□□□□ -0.57
HDAC7-229ENST00000549883 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
HDAC7-229ENST00000549883 ZSCAN10Q96SZ4 725 aaPredicted RBP11.51□□□□□ -0.57
HDAC7-229ENST00000549883 ESYT1Q9BSJ8 1104 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms