RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, human

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-206	ENST00000549842	PFDN2	Q9UHV9	154 aa		6.01	□□□□□ -1.45
CPNE8-206	ENST00000549842	ZMYM5	Q9UJ78	669 aa		6.01	□□□□□ -1.45
CPNE8-206	ENST00000549842	RNF4	P78317	190 aa		6	□□□□□ -1.45
CPNE8-206	ENST00000549842	SSRP1	Q08945	709 aa	Known RBP	6	□□□□□ -1.45
CPNE8-206	ENST00000549842	SPATC1	Q76KD6	591 aa		6	□□□□□ -1.45
CPNE8-206	ENST00000549842	EEPD1	Q7L9B9	569 aa		6	□□□□□ -1.45
CPNE8-206	ENST00000549842	DTWD2	Q8NBA8	298 aa		6	□□□□□ -1.45
CPNE8-206	ENST00000549842	ENOX1	Q8TC92	643 aa	Known RBP	6	□□□□□ -1.45
CPNE8-206	ENST00000549842	TRIT1	Q9H3H1	467 aa	Known RBP	6	□□□□□ -1.45
CPNE8-206	ENST00000549842		B2RBV5	119 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	DIAPH1	O60610	1272 aa	Known RBP	5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	MASP1	P48740	699 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	PLCL1	Q15111	1095 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	LONRF2	Q1L5Z9	754 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	GAB4	Q2WGN9	574 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	CDKAL1	Q5VV42	579 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	UNC5A	Q6ZN44	842 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	ZSWIM2	Q8NEG5	633 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	PI4K2B	Q8TCG2	481 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	EPN3	Q9H201	632 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	PHAX	Q9H814	394 aa	Known RBP	5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	CWC22	Q9HCG8	908 aa	Known RBP	5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	PTCH2	Q9Y6C5	1203 aa		5.99	□□□□□ -1.45
CPNE8-206	ENST00000549842	IQCA1L	A6NCM1	817 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	ITGB5	P18084	799 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	IKZF1	Q13422	519 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	ZNF792	Q3KQV3	632 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	MCTP1	Q6DN14	999 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	VHLL	Q6RSH7	139 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	UBE2F	Q969M7	185 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	CCDC120	Q96HB5	630 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	DHRS1	Q96LJ7	313 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	SLC26A8	Q96RN1	970 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	SPATA9	Q9BWV2	254 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	ATP13A1	Q9HD20	1204 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	MBNL3	Q9NUK0	354 aa	Known RBP	5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	GPATCH2	Q9NW75	528 aa		5.98	□□□□□ -1.45
CPNE8-206	ENST00000549842	CCDC163	A0A0D9SF12	145 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842		H3BS24	57 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	ASMTL	O95671	621 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	JUNB	P17275	347 aa	Predicted RBP	5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	CD96	P40200	585 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	AMPD3	Q01432	767 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	ZP2	Q05996	745 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	TKFC	Q3LXA3	575 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	MRM1	Q6IN84	353 aa	Known RBP	5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	ATG4D	Q86TL0	474 aa	Predicted RBP	5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	LRRC47	Q8N1G4	583 aa	Known RBP	5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	SLC9A7	Q96T83	725 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	ZSWIM5	Q9P217	1185 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	PLAA	Q9Y263	795 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	LTBP3	Q9NS15	1303 aa		5.97	□□□□□ -1.45
CPNE8-206	ENST00000549842	LRRN2	O75325	713 aa		5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	CLEC3A	O75596	197 aa		5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	ESR1	P03372	595 aa		5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	RNASE1	P07998	156 aa	Known RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	VIL1	P09327	827 aa	Known RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	ACR	P10323	421 aa		5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	TAL1	P17542	331 aa	Predicted RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	ZYX	Q15942	572 aa	Known RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	NBPF9	Q3BBW0	867 aa		5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	DALRD3	Q5D0E6	543 aa	Known RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	TMEM67	Q5HYA8	995 aa		5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	NOL8	Q76FK4	1167 aa	Known RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	RPUSD2	Q8IZ73	545 aa	Known RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	DDX56	Q9NY93	547 aa	Known RBP	5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	PRR13	Q9NZ81	148 aa		5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	ADAMTS6	Q9UKP5	1117 aa		5.96	□□□□□ -1.46
CPNE8-206	ENST00000549842	BIN1	O00499	593 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	FAM153B	P0C7A2	387 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	POLR2B	P30876	1174 aa	Known RBP	5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	SLC7A5	Q01650	507 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	BBS9	Q3SYG4	887 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	KIAA1211L	Q6NV74	962 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	KRT26	Q7Z3Y9	468 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	TMEM192	Q8IY95	271 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	FLAD1	Q8NFF5	587 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	SGSM3	Q96HU1	749 aa		5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	SUCO	Q9UBS9	1254 aa	Known RBP	5.95	□□□□□ -1.46
CPNE8-206	ENST00000549842	AGRP	O00253	132 aa		5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	SUSD5	O60279	629 aa		5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	TPP2	P29144	1249 aa	Predicted RBP	5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	SLC10A6	Q3KNW5	377 aa		5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	GNPTAB	Q3T906	1256 aa		5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	ANKRD39	Q53RE8	183 aa		5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	DAGLB	Q8NCG7	672 aa		5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	SMARCC1	Q92922	1105 aa	Predicted RBP	5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	CARS2	Q9HA77	564 aa	Known RBP	5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	RC3H2	Q9HBD1	1191 aa	Known RBP	5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	TYW1	Q9NV66	732 aa	Known RBP	5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	ZNF214	Q9UL59	606 aa	Predicted RBP	5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	CD2AP	Q9Y5K6	639 aa		5.94	□□□□□ -1.46
CPNE8-206	ENST00000549842	NAT2	P11245	290 aa		5.93	□□□□□ -1.46
CPNE8-206	ENST00000549842	GDNF	P39905	211 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms